Evidence map›Paper›PMID 23825025›Full record

ArticleMolecular biology of the cell2013

Interaction between AP-5 and the hereditary spastic paraplegia proteins SPG11 and SPG15.

Jennifer Hirst, Georg H H Borner, James Edgar, Marco Y Hein, Matthias Mann, Frank Buchholz, Robin Antrobus, Margaret S Robinson

Open access · greenAbstract read
In one paragraph

Article in Molecular biology of the cell, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 74 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
74citing papers in PubMed, 1 pooled it
4.2field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

74 citing papers in PubMed, 1 synthesis or guideline pooled it, 114 citations in OpenAlex.

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  20. Protein sorting from endosomes to the TGN.Frontiers in cell and developmental biology · 2023
    Review

14 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Jennifer HirstCambridge Institute for Medical Research, University of Cambridge, Cambridge CB2 0XY, United Kingdom. jh228@cam.ac.uk
Georg H H Borner
James Edgar
Marco Y Hein
Matthias Mann
Frank Buchholz
Robin Antrobus
Margaret S Robinson
University of Cambridge · GBMax Planck Society · DECenter for Systems Biology Dresden · DE

Funding

Wellcome Trust 086598Wellcome Trust 100140
6 · The paper itself

Abstract

The AP-5 complex is a recently identified but evolutionarily ancient member of the family of heterotetrameric adaptor proteins (AP complexes). It is associated with two proteins that are mutated in patients with hereditary spastic paraplegia, SPG11 and SPG15. Here we show that the four AP-5 subunits can be coimmunoprecipitated with SPG11 and SPG15, both from cytosol and from detergent-extracted membranes, with a stoichiometry of ∼1:1:1:1:1:1. Knockdowns of SPG11 or SPG15 phenocopy knockdowns of AP-5 subunits: all six knockdowns cause the cation-independent mannose 6-phosphate receptor to become trapped in clusters of early endosomes. In addition, AP-5, SPG11, and SPG15 colocalize on a late endosomal/lysosomal compartment. Both SPG11 and SPG15 have predicted secondary structures containing α-solenoids related to those of clathrin heavy chain and COPI subunits. SPG11 also has an N-terminal, β-propeller-like domain, which interacts in vitro with AP-5. We propose that AP-5, SPG15, and SPG11 form a coat-like complex, with AP-5 involved in protein sorting, SPG15 facilitating the docking of the coat onto membranes by interacting with PI3P via its FYVE domain, and SPG11 (possibly together with SPG15) forming a scaffold.

Indexed as

Carrier ProteinsCell Line, TumorEndosomesHeLa CellsHumansMultiprotein ComplexesProteinsProtein Structure, TertiaryProtein TransportReceptor, IGF Type 2RNA InterferenceRNA, Small InterferingSpastic Paraplegia, HereditaryTrans-ActivatorsCarrier ProteinsMultiprotein ComplexesProteinsReceptor, IGF Type 2RNA, Small InterferingSPG11 protein, humanTrans-Activatorstranscription factor AP-5ZFYVE26 protein, human

Identifiers

PMID23825025
PMCPMC3744948
OpenAlexW2111411308

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.