Evidence map›Paper›PMID 23823233›Full record

ArticleBiophysical journal2013

A model for the interfacial kinetics of phospholipase D activity on long-chain lipids.

Sheereen Majd, Erik C Yusko, Jerry Yang, David Sept, Michael Mayer

Abstract read
In one paragraph

Article in Biophysical journal, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Lipid-associated oral delivery: Mechanisms and analysis of oral absorption enhancement.Journal of controlled release : official journal of the Controlled Release Society · 2016
    Review
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors.

Sheereen MajdDepartment of Bioengineering, Pennsylvania State University, University Park, Pennsylvania, USA. smajd@engr.psu.edu
Erik C Yusko
Jerry Yang
David Sept
Michael Mayer

Funding

VirologyP30AI036214 · NIAID · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI Maile Ann Young Karris · 1994 to 2026
$78.4M
Chip-Based and Single Protein Transport Assays of Multidrug Resistance TransporteR01GM081705 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI MAYER, MICHAEL · 2007 to 2011
$1.4M
NIAID NIH HHS P30 AI036214NIGMS NIH HHS 1R01GM081705NIGMS NIH HHS R01 GM081705
6 · The paper itself

Abstract

The membrane-active enzyme phospholipase D (PLD) catalyzes the hydrolysis of the phosphodiester bond in phospholipids and plays a critical role in cell signaling. This catalytic reaction proceeds on lipid-water interfaces and is an example of heterogeneous catalysis in biology. Recently we showed that planar lipid bilayers, a previously unexplored model membrane for these kinetic studies, can be used for monitoring interfacial catalytic reactions under well-defined experimental conditions with chemical and electrical access to both sides of the lipid membrane. Employing an assay that relies on the conductance of the pore-forming peptide gramicidin A to monitor PLD activity, the work presented here reveals the kinetics of hydrolysis of long-chain phosphatidylcholine lipids in situ. We have developed an extension of a basic kinetic model for interfacial catalysis that includes product activation and substrate depletion. This model describes the kinetic behavior very well and reveals two kinetic parameters, the specificity constant and the interfacial quality constant. This approach results in a simple and general model to account for product accumulation in interfacial enzyme kinetics.

Indexed as

Models, BiologicalGramicidinKineticsLipid BilayersPhospholipase DGramicidinLipid BilayersPhospholipase D

Identifiers

PMID23823233
PMCPMC3699748

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.