Evidence map›Paper›PMID 23818869›Full record

ArticlePLoS genetics2013

Evidence for two different regulatory mechanisms linking replication and segregation of vibrio cholerae chromosome II.

Tatiana Venkova-Canova, Jong Hwan Baek, Peter C Fitzgerald, Melanie Blokesch, Dhruba K Chattoraj

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
3.2field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 33 citations in OpenAlex.

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  6. Conjugative plasmid-encoded toxin-antitoxin system PrpT/PrpA directly controls plasmid copy number.Proceedings of the National Academy of Sciences of the United States of America · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 2 countries.

Tatiana Venkova-CanovaLaboratory of Biochemistry and Molecular Biology, Center for Cancer Research, National Cancer Institute, National Institutes of Health, Bethesda, Maryland, USA.
Jong Hwan Baek
Peter C Fitzgerald
Melanie Blokesch
Dhruba K Chattoraj
Center for Cancer Research · USÉcole Polytechnique Fédérale de Lausanne · CHNational Cancer Institute · USNational Institutes of Health · US

Funding

Mechanisms of Chromosome Maintenance in BacteriaZIABC010277 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI CHATTORAJ, DHRUBA K · 2009 to 2021
$10.4M
6 · The paper itself

Abstract

Understanding the mechanisms that coordinate replication initiation with subsequent segregation of chromosomes is an important biological problem. Here we report two replication-control mechanisms mediated by a chromosome segregation protein, ParB2, encoded by chromosome II of the model multichromosome bacterium, Vibrio cholerae. We find by the ChIP-chip assay that ParB2, a centromere binding protein, spreads beyond the centromere and covers a replication inhibitory site (a 39-mer). Unexpectedly, without nucleation at the centromere, ParB2 could also bind directly to a related 39-mer. The 39-mers are the strongest inhibitors of chromosome II replication and they mediate inhibition by binding the replication initiator protein. ParB2 thus appears to promote replication by out-competing initiator binding to the 39-mers using two mechanisms: spreading into one and direct binding to the other. We suggest that both these are novel mechanisms to coordinate replication initiation with segregation of chromosomes.

Indexed as

CholeraChromosomes, BacterialChromosome SegregationDNA-Binding ProteinsDNA HelicasesDNA ReplicationHumansTrans-ActivatorsVibrio choleraeDNA-Binding ProteinsDNA Helicasesreplication initiator proteinTrans-Activators

Identifiers

PMID23818869
PMCPMC3688505
OpenAlexW2032265643

What OpenQuestion holds

Textmetadata
LicenceCC0
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.