Evidence map›Paper›PMID 23818620›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2013

Rotavirus mRNAS are released by transcript-specific channels in the double-layered viral capsid.

Javier Periz, Cristina Celma, Bo Jing, Justin N M Pinkney, Polly Roy, Achillefs N Kapanidis

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
1.4field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 51 citations in OpenAlex.

  1. Review
  2. Frontiers in microbiology · 2026
    Review
  3. Article
  4. Article
  5. Review
  6. Review
  7. Article
  8. Article
  9. Viral Capsid and Polymerase in Reoviridae.Sub-cellular biochemistry · 2022
    Article
  10. Article
  11. Review
  12. Article
  13. Review
  14. Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Bluetongue virus assembly and exit pathways.Advances in virus research · 2020
    Review
  20. Reoviridae transcription is more than an open-and-shut case.Nature structural & molecular biology · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Javier PerizBiological Physics Research Group, Clarendon Laboratory, Department of Physics, University of Oxford, Oxford OX1 3PU, United Kingdom.
Cristina Celma
Bo Jing
Justin N M Pinkney
Polly Roy
Achillefs N Kapanidis
University of Oxford · GBLondon School of Hygiene & Tropical Medicine · GBUniversity of London · GB

Funding

Biotechnology and Biological Sciences Research Council BB/H01795X/1European Research Council 261227Wellcome TrustWellcome Trust WT093007
6 · The paper itself

Abstract

Rotaviruses are the single most common cause of fatal and severe childhood diarrheal illness worldwide (>125 million cases annually). Rotavirus shares structural and functional features with many viruses, such as the presence of segmented double-stranded RNA genomes selectively and tightly packed with a conserved number of transcription complexes in icosahedral capsids. Nascent transcripts exit the capsid through 12 channels, but it is unknown whether these channels specialize in specific transcripts or simply act as general exit conduits; a detailed description of this process is needed for understanding viral replication and genomic organization. To this end, we developed a single molecule assay for capturing and identifying transcripts extruded from transcriptionally active viral particles. Our findings support a model in which each channel specializes in extruding transcripts of a specific segment that in turn is linked to a single transcription complex. Our approach can be extended to study other viruses and transcription systems.

Indexed as

Models, BiologicalAnalysis of VarianceAnimalsBiological TransportCapsidMacaca mulattaMicroscopy, FluorescenceOligonucleotidesRNA, MessengerRotavirusTranscription, GeneticOligonucleotidesRNA, Messengerchannel specializationReoviridaesingle molecule hybridizationsingle-stranded RNA

Identifiers

PMID23818620
PMCPMC3718169
OpenAlexW1998681724

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.