Evidence map›Paper›PMID 23816045›Full record

ArticleBioorganic & medicinal chemistry2013

Fluorescent probes for investigation of isoprenoid configuration and size discrimination by bactoprenol-utilizing enzymes.

Anahita Z Mostafavi, Donovan K Lujan, Katelyn M Erickson, Christina D Martinez, Jerry M Troutman

Abstract read
In one paragraph

Article in Bioorganic & medicinal chemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.7field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Article
  3. Synthesis and shift-reagent-assisted full NMR assignment of bacterial (ZChemical communications (Cambridge, England) · 2017
    Article
  4. Article
  5. Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Anahita Z MostafaviUniversity of North Carolina at Charlotte, Department of Chemistry, 9201 University City Blvd., Charlotte, NC 28223-0001, United States.
Donovan K Lujan
Katelyn M Erickson
Christina D Martinez
Jerry M Troutman
University of North Carolina at Charlotte · US

Funding

Biosynthesis of the Immunomodulatory Molecule Capsular Polysaccharide AR15GM100402 · NIGMS · UNIVERSITY OF NORTH CAROLINA CHARLOTTE · PI TROUTMAN, JERRY M · 2012 to 2012
$321k
NIGMS NIH HHS R15 GM100402NIGMS NIH HHS R15GM100402
6 · The paper itself

Abstract

Undecaprenyl Pyrophosphate Synthase (UPPS) is an enzyme critical to the production of complex polysaccharides in bacteria, as it produces the crucial bactoprenol scaffold on which these materials are assembled. Methods to characterize the systems associated with polysaccharide production are non-trivial, in part due to the lack of chemical tools to investigate their assembly. In this report, we develop a new fluorescent tool using UPPS to incorporate a powerful fluorescent anthranilamide moiety into bactoprenol. The activity of this analogue in polysaccharide biosynthesis is then tested with the initiating hexose-1-phosphate transferases involved in Capsular Polysaccharide A biosynthesis in the symbiont Bacteroides fragilis and the asparagine-linked glycosylation system of the pathogenic Campylobacter jejuni. In addition, it is shown that the UPPS used to make this probe is not specific for E-configured isoprenoid substrates and that elongation by UPPS is required for activity with the downstream enzymes.

Indexed as

Alkyl and Aryl TransferasesBacteroidesCampylobacter jejuniFluorescent DyesGlycosylationortho-AminobenzoatesPolysaccharidesStereoisomerismSubstrate SpecificityTerpenesAlkyl and Aryl TransferasesanthranilamidebactoprenolFluorescent Dyesortho-AminobenzoatesPolysaccharidesTerpenesundecaprenyl pyrophosphate synthetaseBactoprenolcis-PrenyltransferaseIsoprenoidUndecaprenolUPPS

Identifiers

PMID23816045
PMCPMC3758898
OpenAlexW2055861885

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.