Evidence map›Paper›PMID 23810825›Full record

ArticleJournal of neuroscience methods2013

Automated multi-day tracking of marked mice for the analysis of social behaviour.

Shay Ohayon, Ofer Avni, Adam L Taylor, Pietro Perona, S E Roian Egnor

Abstract readValidation Study
In one paragraph

Article in Journal of neuroscience methods, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 72 papers.

0numbers the graph read from it
0cells of the map it votes in
72citing papers in PubMed
5.4field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

72 citing papers in PubMed, 159 citations in OpenAlex.

  1. Article
  2. Tagging Very Small Fish: Two Effective and Low Impact Methods.Journal of experimental zoology. Part A, Ecological and integrative physiology · 2026
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12 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Shay OhayonComputation and Neural Systems, California Institute of Technology, 1200 East California Boulevard, Pasadena, CA 91125, USA. shay.ohayon@gmail.com
Ofer Avni
Adam L Taylor
Pietro Perona
S E Roian Egnor
Helix (United States) · USCalifornia Institute of Technology · US

Funding

CRCNS: Automated Behavior Analysis for Model Genetic OrganismR01DA022777 · NIDA · CALIFORNIA INSTITUTE OF TECHNOLOGY · PI PERONA, PIETRO · 2006 to 2010
$1.3M
Howard Hughes Medical InstituteNIDA NIH HHS R01 DA022777
6 · The paper itself

Abstract

A quantitative description of animal social behaviour is informative for behavioural biologists and clinicians developing drugs to treat social disorders. Social interaction in a group of animals has been difficult to measure because behaviour develops over long periods of time and requires tedious manual scoring, which is subjective and often non-reproducible. Computer-vision systems with the ability to measure complex social behaviour automatically would have a transformative impact on biology. Here, we present a method for tracking group-housed mice individually as they freely interact over multiple days. Each mouse is bleach-marked with a unique fur pattern. The patterns are automatically learned by the tracking software and used to infer identities. Trajectories are analysed to measure behaviour as it develops over days, beyond the range of acute experiments. We demonstrate how our system may be used to study the development of place preferences, associations and social relationships by tracking four mice continuously for five days. Our system enables accurate and reproducible characterisation of wild-type mouse social behaviour and paves the way for high-throughput long-term observation of the effects of genetic, pharmacological and environmental manipulations.

Indexed as

Social BehaviorAlgorithmsAnimalsAutomationBehavioral ResearchBehavior, AnimalData Interpretation, StatisticalFemaleHairMaleMiceMice, Inbred C57BLReproducibility of ResultsSex CharacteristicsAutomatedLong termMultiple mice trackingSocial behaviour

Identifiers

PMID23810825
PMCPMC3762481
OpenAlexW2010491620

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.