Evidence map›Paper›PMID 23806148›Full record

ArticleMicrobial cell factories2013

Ornithine cyclodeaminase-based proline production by Corynebacterium glutamicum.

Jaide Vold Korgaard Jensen, Volker Fritz Wendisch

Open access · goldAbstract read
In one paragraph

Article in Microbial cell factories, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
4.6field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 75 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Production of l-glutamate family amino acids inSynthetic and systems biotechnology · 2021
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  12. Fermentative Production ofFrontiers in bioengineering and biotechnology · 2018
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  13. Physiological Response ofFrontiers in microbiology · 2018
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  14. Recombinant Protein Expression System inFrontiers in microbiology · 2018
    Review
  15. Article
  16. Functional Characterization of Four Putative δFrontiers in microbiology · 2017
    Article
  17. A new genome-scale metabolic model ofBiotechnology for biofuels · 2017
    Article
  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Jaide Vold Korgaard JensenGenetics of Prokaryotes, Faculty of Biology & CeBiTec, University of Bielefeld, Universitätsstrasse 25, 33615, Bielefeld, Germany.
Volker Fritz Wendisch
Bielefeld University · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe soil bacterium Corynebacterium glutamicum, best known for its glutamate producing ability, is suitable as a producer of a variety of bioproducts. Glutamate is the precursor of the amino acid proline. Proline biosynthesis typically involves three enzymes and a spontaneous cyclisation reaction. Alternatively, proline can be synthesised from ornithine, an intermediate of arginine biosynthesis. The direct conversion of ornithine to proline is catalysed by ornithine cyclodeaminase. An ornithine overproducing platform strain with deletions of argR and argF (ORN1) has been employed for production of derived compounds such as putrescine. By heterologous expression of ocd this platform strain can be engineered further for proline production.

resultsPlasmid-based expression of ocd encoding the putative ornithine cyclodeaminase of C. glutamicum did not result in detectable proline accumulation in the culture medium. However, plasmid-based expression of ocd from Pseudomonas putida resulted in proline production with yields up to 0.31 ± 0.01 g proline/g glucose. Overexpression of the gene encoding a feedback-alleviated N-acetylglutamate kinase further increased proline production to 0.36 ± 0.01 g/g. In addition, feedback-alleviation of N-acetylglutamate kinase entailed growth-coupled production of proline and reduced the accumulation of by-products in the culture medium.

conclusionsThe product spectrum of the platform strain C. glutamicum ORN1 was expanded to include the amino acid L-proline. Upon further development of the ornithine overproducing platform strain, industrial production of amino acids of the glutamate family and derived bioproducts such as diamines might become within reach.

Indexed as

Ammonia-LyasesArginineBacterial ProteinsCorynebacterium glutamicumMetabolic EngineeringPhosphotransferases (Carboxyl Group Acceptor)PlasmidsProlinePseudomonas putidaacetylglutamate kinaseAmmonia-LyasesArginineBacterial Proteinsornithine cyclodeaminasePhosphotransferases (Carboxyl Group Acceptor)Proline

Identifiers

PMID23806148
PMCPMC3702523
OpenAlexW2169840290

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.