Evidence map›Paper›PMID 23805748›Full record

ArticleFaraday discussions2013

Formation and analysis of topographical domains between lipid membranes tethered by DNA hybrids of different lengths.

Minsub Chung, Bon Jun Koo, Steven G Boxer

Abstract read
In one paragraph

Article in Faraday discussions, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed.

  1. Article
  2. Review
  3. Polysaccharide functionalization reduces lipid vesicle stiffness.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Amphiphilic DNA nanostructures for bottom-up synthetic biology.Chemical communications (Cambridge, England) · 2021
    Review
  9. DNA self-organization controls valence in programmable colloid design.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  10. Article
  11. Article
  12. Selected tools to visualize membrane interactions.European biophysics journal : EBJ · 2021
    Review
  13. In vitro reconstitution of T cell receptor-mediated segregation of the CD45 phosphatase.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  14. Review
  15. Review
  16. Article
  17. Article
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Minsub ChungBioengineering Department, University of California, Berkeley, 342 Stanley Hall, Berkeley, CA 94706, USA. minsubc@berkeley.edu
Bon Jun Koo
Steven G Boxer

Funding

Membrane Fusion, Organization, and Dynamics Using Supported BilayersR01GM069630 · NIGMS · STANFORD UNIVERSITY · PI BOXER, STEVEN G. · 2004 to 2015
$3.8M
NIGMS NIH HHS GM069630NIGMS NIH HHS R01 GM069630
6 · The paper itself

Abstract

We recently described a strategy to prepare DNA-tethered lipid membranes either to fixed DNA on a surface or to DNA displayed on a supported bilayer [Boxer et al., J. Struct. Biol., 2009, 168, 190; Boxer et al., Langmuir, 2011, 27, 5492]. With the latter system, the DNA hybrids are laterally mobile; when orthogonal sense-antisense pairs of different lengths are used, the DNA hybrids segregate by height and the tethered membrane deforms to accommodate the height difference. This architecture is particularly useful for modelling interactions between membranes mediated by molecular recognition and resembles cell-to-cell junctions. The length, affinity and population of the DNA hybrids between the membranes are completely controllable. Interesting patterns of height segregation are observed by fluorescence interference contrast microscopy. Diverse behavior is observed in the segregation and pattern forming process and possible mechanisms are discussed. This model system captures some of the essential physics of synapse formation and is a step towards understanding lipid membrane behaviour in cell-to-cell junctions.

Indexed as

1,2-DipalmitoylphosphatidylcholineBase SequenceCell MembraneDNALipid BilayersMembrane LipidsMicroscopy, FluorescenceModels, ChemicalMolecular Sequence DataUnilamellar Liposomes1,2-DipalmitoylphosphatidylcholineDNALipid BilayersMembrane LipidsUnilamellar Liposomes

Identifiers

PMID23805748
PMCPMC3703934

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.