Evidence map›Paper›PMID 23804767›Full record

ArticleNucleic acids research2013

The eIF2α/ATF4 pathway is essential for stress-induced autophagy gene expression.

Wafa B'chir, Anne-Catherine Maurin, Valérie Carraro, Julien Averous, Céline Jousse, Yuki Muranishi, Laurent Parry, Georges Stepien, Pierre Fafournoux, Alain Bruhat

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 687 papers.

0numbers the graph read from it
0cells of the map it votes in
687citing papers in PubMed
29.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

687 citing papers in PubMed, 1,100 citations in OpenAlex.

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627 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Wafa B'chirINRA, UMR 1019 Nutrition Humaine, Centre de Clermont-Ferrand-Theix, F-63122 Saint Genès Champanelle, France and Université Clermont 1, UFR Médecine, UMR 1019 Nutrition Humaine, Clermont-Ferrand, France.
Anne-Catherine Maurin
Valérie Carraro
Julien Averous
Céline Jousse
Yuki Muranishi
Laurent Parry
Georges Stepien
Pierre Fafournoux
Alain Bruhat
Clermont Université · FRCentre de Recherche en Nutrition Humaine d'Auvergne · FRInstitut National de la Recherche Agronomique · MA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In response to different environmental stresses, eIF2α phosphorylation represses global translation coincident with preferential translation of ATF4, a master regulator controlling the transcription of key genes essential for adaptative functions. Here, we establish that the eIF2α/ATF4 pathway directs an autophagy gene transcriptional program in response to amino acid starvation or endoplasmic reticulum stress. The eIF2α-kinases GCN2 and PERK and the transcription factors ATF4 and CHOP are also required to increase the transcription of a set of genes implicated in the formation, elongation and function of the autophagosome. We also identify three classes of autophagy genes according to their dependence on ATF4 and CHOP and the binding of these factors to specific promoter cis elements. Furthermore, different combinations of CHOP and ATF4 bindings to target promoters allow the trigger of a differential transcriptional response according to the stress intensity. Overall, this study reveals a novel regulatory role of the eIF2α-ATF4 pathway in the fine-tuning of the autophagy gene transcription program in response to stresses.

Indexed as

Transcriptional ActivationActivating Transcription Factor 4Adaptor Proteins, Signal TransducingAmino AcidsAnimalsAutophagyCells, CulturedeIF-2 KinaseEndoplasmic Reticulum StressEukaryotic Initiation Factor-2Heat-Shock ProteinsMiceProtein Serine-Threonine KinasesResponse ElementsSequestosome-1 ProteinTranscription Factor CHOPActivating Transcription Factor 4Adaptor Proteins, Signal TransducingAmino AcidsEif2ak4 protein, mouseeIF-2 KinaseEukaryotic Initiation Factor-2Heat-Shock ProteinsProtein Serine-Threonine KinasesSequestosome-1 ProteinSqstm1 protein, mouseTranscription Factor CHOP

Identifiers

PMID23804767
PMCPMC3763548
OpenAlexW2048098925

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.