Evidence map›Paper›PMID 23804563›Full record

ArticleHuman mutation2013

The Sac1 domain of SYNJ1 identified mutated in a family with early-onset progressive Parkinsonism with generalized seizures.

Catharine E Krebs, Siamak Karkheiran, James C Powell, Mian Cao, Vladimir Makarov, Hossein Darvish, Gilbert Di Paolo, Ruth H Walker, Gholam Ali Shahidi, Joseph D Buxbaum and 3 more

Open access · bronzeAbstract readCase Reports
In one paragraph

Article in Human mutation, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 195 papers.

0numbers the graph read from it
0cells of the map it votes in
195citing papers in PubMed
13.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

195 citing papers in PubMed, 335 citations in OpenAlex.

  1. Dystrophic changes of nigrostriatal axons harboring aProceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  2. Synaptic Proteostasis in Health and Disease.Journal of neurochemistry · 2026
    Review
  3. Review
  4. Article
  5. Review
  6. Article
  7. Article
  8. Biallelic SYNJ1 Variants in a patient with multiple system atrophy mimic syndrome.Neurological sciences : official journal of the Italian Neurological Society and of the Italian Society of Clinical Neurophysiology · 2026
    Article
  9. Review
  10. Insights Into the Antigenic Repertoire of Unclassified Synaptic Antibodies.Annals of clinical and translational neurology · 2026
    Article
  11. Roles in physiology and disease of the inositol phosphatase synaptojanin 1.Biochimica et biophysica acta. Molecular and cell biology of lipids · 2026
    Review
  12. Subcellular Cartography of the Phosphoinositide Multiverse.Biochimica et biophysica acta. Molecular and cell biology of lipids · 2026
    Review
  13. Review
  14. Article
  15. Review
  16. Article
  17. Biogenesis and reformation of synaptic vesicles.The Journal of physiology · 2025
    Review
  18. Article
  19. Review
  20. Review

135 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 8 institutions in 2 countries.

Catharine E KrebsDepartment of Neurology, Icahn School of Medicine at Mount Sinai, New York City, New York, USA. coro.paisanruiz@mssm.edu
Siamak Karkheiran
James C Powell
Mian Cao
Vladimir Makarov
Hossein Darvish
Gilbert Di Paolo
Ruth H Walker
Gholam Ali Shahidi
Joseph D Buxbaum
Pietro De Camilli
Zhenyu Yue
Coro Paisán-Ruiz
Allen Institute for Brain Science · USHoward Hughes Medical Institute · USIcahn School of Medicine at Mount Sinai · USRasool Akram Hospital · IRCity University of New York · USColumbia University Irving Medical Center · USJames J. Peters VA Medical Center · USShahid Beheshti University of Medical Sciences · IR

Funding

Yale/NIDA Neuroproteomics Research CenterP30DA018343 · NIDA · YALE UNIVERSITY · PI Marina R Picciotto · 2004 to 2026
$37.1M
Neuronal Autophagy: a Cell-Autonomous Protection MechanismR01NS060123 · NINDS · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI Zhenyu Yue · 2008 to 2026
$9.2M
Using BAC-transgenic and Proteomic Approach to Study LRRK2 Biology and PathologyR01NS060809 · NINDS · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI YUE, ZHENYU · 2008 to 2017
$4.2M
Role of phospholipids in membrane traffic at the synapseR01NS056049 · NINDS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI LIEM, RONALD K. · 2006 to 2016
$3.7M
Novel Statistical methods for DNA Sequencing Data, and applications to Autism.R01MH095797 · NIMH · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI IONITA, IULIANA · 2012 to 2022
$3.1M
Molecular Mechanisms in Synaptic Vesicle RecyclingR37NS036251 · NINDS · YALE UNIVERSITY · PI DE CAMILLI, PIETRO · 2010 to 2016
$2.7M
Elucidating and understanding the genetic basis of movement disordersR01NS079388 · NINDS · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI PAISAN-RUIZ, CORO · 2013 to 2017
$1.9M
Cellular and Molecular Basis for Initial PD Pathogenic Events in LRRK2 BAC ModelsR01NS072359 · NINDS · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI BLITZER, ROBERT D., YUE, ZHENYU · 2011 to 2015
$1.8M
NIDA NIH HHS P30 DA018343NIMH NIH HHS R01 MH095797NIMH NIH HHS R01MH095797NINDS NIH HHS R01 NS056049NINDS NIH HHS R01 NS060123NINDS NIH HHS R01 NS060809NINDS NIH HHS R01NS060809NINDS NIH HHS R01 NS072359NINDS NIH HHS R01NS072359NINDS NIH HHS R01 NS079388NINDS NIH HHS R01NS079388NINDS NIH HHS R37 NS036251NINDS NIH HHS R37NS036251
6 · The paper itself

Abstract

This study aimed to elucidate the genetic causes underlying early-onset Parkinsonism (EOP) in a consanguineous Iranian family. To attain this, homozygosity mapping and whole-exome sequencing were performed. As a result, a homozygous mutation (c.773G>A; p.Arg258Gln) lying within the NH2 -terminal Sac1-like inositol phosphatase domain of polyphosphoinositide phosphatase synaptojanin 1 (SYNJ1), which has been implicated in the regulation of endocytic traffic at synapses, was identified as the disease-segregating mutation. This mutation impaired the phosphatase activity of SYNJ1 against its Sac1 domain substrates in vitro. We concluded that the SYNJ1 mutation identified here is responsible for the EOP phenotype seen in our patients probably due to deficiencies in its phosphatase activity and consequent impairment of its synaptic functions. Our finding not only opens new avenues of investigation in the synaptic dysfunction mechanisms associated with Parkinsonism, but also suggests phosphoinositide metabolism as a novel therapeutic target for Parkinsonism.

Indexed as

AdultAge of OnsetBrainConsanguinityEpilepsy, GeneralizedExomeFemaleGenes, RecessiveGenotypeHEK293 CellsHumansMaleParkinsonian DisordersPhosphoinositide 5-PhosphatasesPhosphoric Monoester HydrolasesPhylogenyPhosphoinositide 5-PhosphatasesPhosphoric Monoester Hydrolasesautosomal recessive Parkinsonismhomozygosity mappingSYNJ1whole-exome sequencing

Identifiers

PMID23804563
PMCPMC3790461
OpenAlexW2075832622

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.