Evidence map›Paper›PMID 23801630›Full record

ArticleBlood2013

MicroRNA expression profiling identifies molecular signatures associated with anaplastic large cell lymphoma.

Cuiling Liu, Javeed Iqbal, Julie Teruya-Feldstein, Yulei Shen, Magdalena Julia Dabrowska, Karen Dybkaer, Megan S Lim, Roberto Piva, Antonella Barreca, Elisa Pellegrino and 13 more

Abstract read
In one paragraph

Article in Blood, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 52 papers.

0numbers the graph read from it
0cells of the map it votes in
52citing papers in PubMed
8.5field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

52 citing papers in PubMed, 88 citations in OpenAlex.

  1. Trial
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  10. Genome-Wide miRNA Expression Profiling of Molecular Subgroups of Peripheral T-cell Lymphoma.Clinical cancer research : an official journal of the American Association for Cancer Research · 2021
    Article
  11. Review
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  13. Article
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  15. Article
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  18. Article
  19. MicroRNAs in Autoimmunity and Hematological Malignancies.International journal of molecular sciences · 2018
    Review
  20. MiRNA Dysregulation in Childhood Hematological Cancer.International journal of molecular sciences · 2018
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

23 authors at 7 institutions in 4 countries.

Cuiling LiuDepartment of Pathology and Microbiology, University of Nebraska Medical Center, Omaha, NE;
Javeed Iqbal
Julie Teruya-Feldstein
Yulei Shen
Magdalena Julia Dabrowska
Karen Dybkaer
Megan S Lim
Roberto Piva
Antonella Barreca
Elisa Pellegrino
Elisa Spaccarotella
Cynthia M Lachel
Can Kucuk
Chun-Sun Jiang
Xiaozhou Hu
Sharathkumar Bhagavathi
Timothy C Greiner
Dennis D Weisenburger
Patricia Aoun
Sherrie L Perkins
Timothy W McKeithan
Giorgio Inghirami
Wing C Chan
University of Nebraska Medical Center · USUniversity of Turin · ITAalborg University Hospital · DKAarhus University Hospital · DKMemorial Sloan Kettering Cancer Center · USMichigan Medicine · USUniversity of Utah · US

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Nicholas D Socci · 1985 to 2026
$347.4M
Molecular Signatures to Improve Diagnosis and Outcome PrU01CA114778 · NCI · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI CHAN, WING C. · 2005 to 2009
$8.7M
NCI NIH HHS 5U01/CA114778NCI NIH HHS P30 CA008748NCI NIH HHS U01 CA114778
6 · The paper itself

Abstract

Anaplastic large-cell lymphomas (ALCLs) encompass at least 2 systemic diseases distinguished by the presence or absence of anaplastic lymphoma kinase (ALK) expression. We performed genome-wide microRNA (miRNA) profiling on 33 ALK-positive (ALK[+]) ALCLs, 25 ALK-negative (ALK[-]) ALCLs, 9 angioimmunoblastic T-cell lymphomas, 11 peripheral T-cell lymphomas not otherwise specified (PTCLNOS), and normal T cells, and demonstrated that ALCLs express many of the miRNAs that are highly expressed in normal T cells with the prominent exception of miR-146a. Unsupervised hierarchical clustering demonstrated distinct clustering of ALCL, PTCL-NOS, and the AITL subtype of PTCL. Cases of ALK(+) ALCL and ALK(-) ALCL were interspersed in unsupervised analysis, suggesting a close relationship at the molecular level. We identified an miRNA signature of 7 miRNAs (5 upregulated: miR-512-3p, miR-886-5p, miR-886-3p, miR-708, miR-135b; 2 downregulated: miR-146a, miR-155) significantly associated with ALK(+) ALCL cases. In addition, we derived an 11-miRNA signature (4 upregulated: miR-210, miR-197, miR-191, miR-512-3p; 7 downregulated: miR-451, miR-146a, miR-22, miR-455-3p, miR-455-5p, miR-143, miR-494) that differentiates ALK(-) ALCL from other PTCLs. Our in vitro studies identified a set of 32 miRNAs associated with ALK expression. Of these, the miR-17∼92 cluster and its paralogues were also highly expressed in ALK(+) ALCL and may represent important downstream effectors of the ALK oncogenic pathway.

Indexed as

Gene Expression ProfilingGene Expression Regulation, NeoplasticAdolescentAdultAgedAged, 80 and overAnaplastic Lymphoma KinaseAntigens, SurfaceCell Line, TumorChildChild, PreschoolCluster AnalysisFemaleGene ExpressionGene OrderHumansALK protein, humanAnaplastic Lymphoma KinaseAntigens, SurfaceMicroRNAsReceptor Protein-Tyrosine Kinases

Identifiers

PMID23801630
PMCPMC3778551
OpenAlexW2019103098

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.