Evidence map›Paper›PMID 23799295›Full record

ArticleGenetic testing and molecular biomarkers2013

Marker gene screening for human mesenchymal stem cells in early osteogenic response to bone morphogenetic protein 6 with DNA microarray.

Shien Zou, Shaofen Zhang, Qiqi Long, Yuankui Cao, Wei Zhang

Erratum issuedOpen access · greenAbstract read
In one paragraph

Article in Genetic testing and molecular biomarkers, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact, top 89% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 2 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Shien ZouDepartment of Gynecology, Obstetrics and Gynecology Hospital of Fudan University, Shanghai 200011, China.
Shaofen Zhang
Qiqi Long
Yuankui Cao
Wei Zhang
Obstetrics and Gynecology Hospital of Fudan University · CNFudan University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

aimsMicroarray data were analyzed using bioinformatic tools to screen marker genes of human mesenchymal stem cells (hMSC) in response to bone morphogenetic protein 6 (BMP6).

resultsA total of 190 differentially expressed genes were identified. The interaction network was divided into three functional modules. These genes were connected with BMP signaling pathways and regulation of cell processes, while NOG and BMPR2 participated in the transforming growth factor-beta signal pathway. Besides, several related small molecules were acquired.

conclusionMarker genes in osteogenic responses to BMP6 treatment for hMSC were screened with microarray data along with elaborate function analysis by bioinformatics. NOG and BMPR2 showed potential to become indicators to monitor the directed differentiation of hMSC into osteoblasts, which can be used for bone disease treatment. Moreover, small molecules such as W-13 were retrieved and provided directions for future drug design.

Indexed as

BiomarkersBone Morphogenetic Protein 6Cell DifferentiationFemaleGene Expression ProfilingGene Expression RegulationGenetic MarkersHumansMaleMesenchymal Stem CellsOligonucleotide Array Sequence AnalysisOsteoblastsSignal TransductionSulfonamidesBiomarkersBMP6 protein, humanBone Morphogenetic Protein 6Genetic MarkersN-(4-aminobutyl)-5-chloro-2-naphthalenesulfonamideSulfonamides

Identifiers

PMID23799295
PMCPMC3732412
OpenAlexW2146507203

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.