Evidence map›Paper›PMID 23798929›Full record

ArticleJournal of research in medical sciences : the official journal of Isfahan University of Medical Sciences2012

Development of PCR-based method for detection of Enterobacteriaceae in septicemia.

Hossein Fazzeli, Mohammad Reza Arabestani, Bahram Nasr Esfahani, Farzin Khorvash, Mohammad Reza Pourshafie, Sharareh Moghim, Hajieh Ghasemian Safaei, Jamshid Faghri, Tahmine Narimani

Open access · greenAbstract read
In one paragraph

Article in Journal of research in medical sciences : the official journal of Isfahan University of Medical Sciences, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.4field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Determination of virulence determinants ofGastroenterology and hepatology from bed to bench · 2019
    Article
  7. Article
  8. Biohydrogen production from sugarcane bagasse hydrolysate: effects of pH, S/X, FeEnvironmental science and pollution research international · 2017
    Article
  9. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Hossein FazzeliDepartment of Microbiology, Faculty of Medicine, Isfahan University of Medical Sciences, Isfahan, Iran.
Mohammad Reza Arabestani
Bahram Nasr Esfahani
Farzin Khorvash
Mohammad Reza Pourshafie
Sharareh Moghim
Hajieh Ghasemian Safaei
Jamshid Faghri
Tahmine Narimani
Isfahan University of Medical Sciences · IRPasteur Institute of Iran · IR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectiveSepsis is a systemic inflammatory response associated with high mortality rates in the clinical setting. A multiplex endpoint polymerase chain reaction (PCR) based assay for rapid detection of enterobacteriaceae involved in septicemia, which included Internal Control (IC) and 16S rDNA, is presented here. To develop a panel of primers for DNA fragments of 16S rDNA, enterobacteriaceae, IC, and evaluate analytical sensitivity and specificity of the test. MATERIALS AND

methodsPrimers for amplification of enterobacteriaceae, IC, and16S rDNA were designed, and then PCR was performed. Minimal analytical sensitivity was determined by cloning and colony PCR, and specificity was tested on the basis of their respective standard strains. This study is a cross-sectional Model.

resultsOur results showed the rpoB gene as the most promising target for detection of enterobacteriaceae by PCR amplification. Specificity and sensitivity of endpoint PCR were 100%, 100%, and 100%, and 10, 1, and 100 copies/reaction for enterobacteriaceae, IC, and 16S rDNA, respectively.

conclusionThe molecular panel presented offers the advantage of an easy, reliable, and cost-effective system when compared to other molecular detection methods. However, further evaluation is needed. Our assay holds promising for more rapid pathogens related in clinical sepsis.

Indexed as

Blood cultureIntensive Care Unitpathogenic bacteriapolymerase chain reactionsepsis

Identifiers

PMID23798929
PMCPMC3685785
OpenAlexW1835736326

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.