Evidence map›Paper›PMID 23798001›Full record

ArticleProteomics2013

Oncogene-induced cellular senescence elicits an anti-Warburg effect.

Mingxi Li, Kenneth R Durbin, Steve M M Sweet, Jeremiah D Tipton, Yupeng Zheng, Neil L Kelleher

Abstract read
In one paragraph

Article in Proteomics, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed.

  1. Trial
  2. Article
  3. Article
  4. Review
  5. Review
  6. Review
  7. Article
  8. Review
  9. Mechanisms and Regulation of Cellular Senescence.International journal of molecular sciences · 2021
    Review
  10. Review
  11. Translational Control during Cellular Senescence.Molecular and cellular biology · 2021
    Review
  12. Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Review
  18. Article
  19. Detection of the Ubiquitinome in Cells Undergoing Oncogene-Induced Senescence.Methods in molecular biology (Clifton, N.J.) · 2017
    Article
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors.

Mingxi LiDepartment of Biochemistry, University of Illinois at Urbana-Champaign, Urbana, IL, USA; Department of Molecular Biosciences, Northwestern University, Evanston, IL, USA.
Kenneth R Durbin
Steve M M Sweet
Jeremiah D Tipton
Yupeng Zheng
Neil L Kelleher

Funding

Eukaryotic Post-Translational ModificationsR01GM067193 · NIGMS · UNIVERSITY OF ILLINOIS URBANA-CHAMPAIGN · PI KELLEHER, NEIL L · 2003 to 2015
$4.0M
NIGMS NIH HHS GM 067193NIGMS NIH HHS R01 GM067193
6 · The paper itself

Abstract

Cellular senescence, an irreversible cell cycle arrest induced by a diversity of stimuli, has been considered as an innate tumor suppressing mechanism with implications and applications in cancer therapy. Using a targeted proteomics approach, we show that fibroblasts induced into senescence by expression of oncogenic Ras exhibit a decrease of global acetylation on all core histones, consistent with formation of senescence-associated heterochromatic foci. We also detected clear increases in repressive markers (e.g. >50% elevation of H3K27me2/3) along with decreases in histone marks associated with increased transcriptional expression/elongation (e.g. H3K36me2/3). Despite the increases in repressive marks of chromatin, 179 loci (of 2206 total) were found to be upregulated by global quantitative proteomics. The changes in the cytosolic proteome indicated an upregulation of mitochondrial proteins and downregulation of proteins involved in glycolysis. These alterations in primary metabolism are opposite to the well-known Warburg effect observed in cancer cells. This study significantly improves our understanding of stress-induced senescence and provides a potential application for triggering it in antiproliferative strategies that target the primary metabolism in cancer cells.

Indexed as

OncogenesAcetylationCell Cycle CheckpointsCell LineCell ProliferationCellular SenescenceChromatinChromatography, LiquidCytosolDown-RegulationFibroblastsGlycolysisHistonesHumansMitochondrial ProteinsNeoplasmsChromatinHistonesMitochondrial ProteinsProteomeras ProteinsCell biologyHistonesMetabolismOxidative phosphorylationSenescence

Identifiers

PMID23798001
PMCPMC3867201

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.