Evidence map›Paper›PMID 23796519›Full record

ArticleJournal of molecular biology2013

Dissecting the effects of periplasmic chaperones on the in vitro folding of the outer membrane protein PagP.

Lindsay M McMorran, Alice I Bartlett, Gerard H M Huysmans, Sheena E Radford, David J Brockwell

Abstract read
In one paragraph

Article in Journal of molecular biology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed.

  1. Article
  2. FkpA enhances membrane protein folding using an extensive interaction surface.Protein science : a publication of the Protein Society · 2023
    Article
  3. The Formation ofMembranes · 2023
    Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Review
  16. Review
  17. Article
  18. Article
  19. Envelope Stress Responses: An Interconnected Safety Net.Trends in biochemical sciences · 2017
    Review
  20. From Chaperones to the Membrane with a BAM!Trends in biochemical sciences · 2016
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Lindsay M McMorranAstbury Centre for Structural Molecular Biology, University of Leeds, Leeds LS2 9JT, UK.
Alice I Bartlett
Gerard H M Huysmans
Sheena E Radford
David J Brockwell

Funding

Biotechnology and Biological Sciences Research Council BB/526502/1Biotechnology and Biological Sciences Research Council BB/F01614X/1Wellcome Trust 094232/Z/10/Z
6 · The paper itself

Abstract

Although many periplasmic folding factors have been identified, the mechanisms by which they interact with unfolded outer membrane proteins (OMPs) to promote correct folding and membrane insertion remain poorly understood. Here, we have investigated the effect of two chaperones, Skp and SurA, on the folding kinetics of the OMP, PagP. Folding kinetics of PagP into both zwitterionic diC12:0PC (1,2-dilauroyl-sn-glycero-3-phosphocholine) liposomes and negatively charged 80:20 diC12:0PC:diC12:0PG [1,2-dilauroyl-sn-glycero-3-phospho-(1'-rac-glycerol)] liposomes were investigated using a combination of spectroscopic and SDS-PAGE assays. The results indicate that Skp modulates the observed rate of PagP folding in a manner that is dependent on the composition of the membrane and the ionic strength of the buffer used. These data suggest that electrostatic interactions play an important role in Skp-assisted substrate delivery to the membrane. In contrast, SurA showed no effect on the observed folding rates of PagP, consistent with the view that these chaperones act by distinct mechanisms in partially redundant parallel chaperone pathways that facilitate OMP assembly. In addition to delivery of the substrate protein to the membrane, the ability of Skp to prevent OMP aggregation was investigated. The results show that folding and membrane insertion of PagP can be restored, in part, by Skp in conditions that strongly favour PagP aggregation. These results illustrate the utility of in vitro systems for dissecting the complex folding environment encountered by OMPs in the periplasm and demonstrate the key role of Skp in holding aggregation-prone OMPs prior to their direct or indirect delivery to the membrane.

Indexed as

AcyltransferasesCarrier ProteinsDNA-Binding ProteinsEscherichia coliEscherichia coli ProteinsKineticsLiposomesMembrane ProteinsMolecular ChaperonesPeptidylprolyl IsomerasePeriplasmProtein FoldingAcyltransferasesCarrier ProteinsDNA-Binding ProteinsEscherichia coli ProteinsLiposomesMembrane ProteinsMolecular ChaperonesPagP protein, E coliPeptidylprolyl IsomeraseSkp protein, E coliSurA protein, E coli1,2-dilauroyl-sn-glycero-3-phospho-(1′-rac-glycerol)1,2-dilauroyl-sn-glycero-3-phosphocholineBAMdiC(12:0)PCdiC(12:0)PGfolding kineticsHis-tagged PagPHT PagPlarge unilamellar vesiclelipid-to-protein ratiolipopolysaccharideLPRLPSLUVmembrane protein foldingOMOMPouter membraneouter membrane proteinPagPSkpSurAβ-barrel assembly machine

Identifiers

PMID23796519
PMCPMC3906610

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.