Evidence map›Paper›PMID 23794622›Full record

ArticleJournal of bacteriology2013

Genes required for and effects of alginate overproduction induced by growth of Pseudomonas aeruginosa on Pseudomonas isolation agar supplemented with ammonium metavanadate.

F Heath Damron, Mariette Barbier, Elizabeth S McKenney, Michael J Schurr, Joanna B Goldberg

Open access · bronzeAbstract read
In one paragraph

Article in Journal of bacteriology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.4field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 15 citations in OpenAlex.

  1. Genomic variation inMicrobiology spectrum · 2025
    Article
  2. Journal of bacteriology · 2024
    Article
  3. Monoclonal antibodies against lipopolysaccharide protect againstFrontiers in cellular and infection microbiology · 2023
    Article
  4. Review
  5. RidA Proteins Protect against Metabolic Damage by Reactive Intermediates.Microbiology and molecular biology reviews : MMBR · 2020
    Review
  6. Article
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

F Heath DamronDepartment of Microbiology, Immunology, and Cancer Biology, University of Virginia Health System, Charlottesville, VA, USA.
Mariette Barbier
Elizabeth S McKenney
Michael J Schurr
Joanna B Goldberg
University of Virginia Health System · USUniversity of Colorado Denver · US

Funding

Live Attenuated Recombinant Bacterial Delivery of Polysaccharide Vaccine AntigensR01AI068112 · NIAID · UNIVERSITY OF VIRGINIA · PI GOLDBERG, JOANNA B · 2006 to 2010
$2.0M
Preparation of trypanosome cdc2-related kinase 9 for high throughput screeningR21AI109447 · NIAID · UNIVERSITY OF CONNECTICUT SCH OF MED/DNT · PI GUNZL, ARTHUR · 2014 to 2015
$456k
MULTIPLE LEVELS OF REGULATION OF IFN GENE EXPRESSIONR01AI010944 · NIAID · JOHNS HOPKINS UNIVERSITY · PI PITHA-ROWE, PAULA M · 1985 to 1987
–
NIAID NIH HHS R01 AI068112NIAID NIH HHS R21 AI109447NIAID NIH HHS R21 AI1094487
6 · The paper itself

Abstract

Pseudomonas aeruginosa is an opportunistic pathogen that can adapt to changing environments and can secrete an exopolysaccharide known as alginate as a protection response, resulting in a colony morphology and phenotype referred to as mucoid. However, how P. aeruginosa senses its environment and activates alginate overproduction is not fully understood. Previously, we showed that Pseudomonas isolation agar supplemented with ammonium metavanadate (PIAAMV) induces P. aeruginosa to overproduce alginate. Vanadate is a phosphate mimic and causes protein misfolding by disruption of disulfide bonds. Here we used PIAAMV to characterize the pathways involved in inducible alginate production and tested the global effects of P. aeruginosa growth on PIAAMV by a mutant library screen, by transcriptomics, and in a murine acute virulence model. The PA14 nonredundant mutant library was screened on PIAAMV to identify new genes that are required for the inducible alginate stress response. A functionally diverse set of genes encoding products involved in cell envelope biogenesis, peptidoglycan remodeling, uptake of phosphate and iron, phenazine biosynthesis, and other processes were identified as positive regulators of the mucoid phenotype on PIAAMV. Transcriptome analysis of P. aeruginosa cultures growing in the presence of vanadate showed differential expression of genes involved in virulence, envelope biogenesis, and cell stress pathways. In this study, it was observed that growth on PIAAMV attenuates P. aeruginosa in a mouse pneumonia model. Induction of alginate overproduction occurs as a stress response to protect P. aeruginosa, but it may be possible to modulate and inhibit these pathways based on the new genes identified in this study.

Indexed as

Gene Expression Regulation, BacterialHeat-Shock ResponseAcute DiseaseAgarAlginatesAnimalsBacterial ProteinsCulture MediaDisease Models, AnimalGene Expression ProfilingGlucuronic AcidHexuronic AcidsHumansMiceMolecular Sequence DataOligonucleotide Array Sequence AnalysisAgarAlginatesammonium metavanadateBacterial ProteinsCulture MediaGlucuronic AcidHexuronic AcidsVanadates

Identifiers

PMID23794622
PMCPMC3754734
OpenAlexW2115721367

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.