Evidence map›Paper›PMID 23793643›Full record

ArticleApplied and environmental microbiology2013

Tracking down biotransformation to the genetic level: identification of a highly flexible glycosyltransferase from Saccharothrix espanaensis.

Tina Strobel, Yvonne Schmidt, Anton Linnenbrink, Andriy Luzhetskyy, Marta Luzhetska, Takaaki Taguchi, Elke Brötz, Thomas Paululat, Maryna Stasevych, Oleg Stanko and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in Applied and environmental microbiology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.9field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. A Ring Opening-Annulation Reaction of Anthra[1,2-Molecules (Basel, Switzerland) · 2022
    Article
  3. Article
  4. Functional Characterization of a Regiospecific Sugar-Applied and environmental microbiology · 2022
    Article
  5. Article
  6. Article
  7. Identification and Characterization of a NovelMolecules (Basel, Switzerland) · 2020
    Article
  8. Biosynthesis of Rhamnosylated Anthraquinones inJournal of microbiology and biotechnology · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 3 countries.

Tina StrobelAlbert Ludwigs University of Freiburg, Department of Pharmaceutical Biology and Biotechnology, Freiburg, Germany.
Yvonne Schmidt
Anton Linnenbrink
Andriy Luzhetskyy
Marta Luzhetska
Takaaki Taguchi
Elke Brötz
Thomas Paululat
Maryna Stasevych
Oleg Stanko
Volodymyr Novikov
Andreas Bechthold
University of Freiburg · DELviv Polytechnic National University · UAHelmholtz Institute for Pharmaceutical Research Saarland · DEMusashino University · JPUniversity of Siegen · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Saccharothrix espanaensis is a member of the order Actinomycetales. The genome of the strain has been sequenced recently, revealing 106 glycosyltransferase genes. In this paper, we report the detection of a glycosyltransferase from Saccharothrix espanaensis which is able to rhamnosylate different phenolic compounds targeting different positions of the molecules. The gene encoding the flexible glycosyltransferase is not located close to a natural product biosynthetic gene cluster. Therefore, the native function of this enzyme might be not the biosynthesis of a secondary metabolite but the glycosylation of internal and external natural products as part of a defense mechanism.

Indexed as

ActinomycetalesBiotransformationChromatography, High Pressure LiquidGene DeletionGlycosyltransferasesMass SpectrometryPhenolsPhylogenyRhamnoseSequence Homology, Amino AcidGlycosyltransferasesPhenolsRhamnose

Identifiers

PMID23793643
PMCPMC3753978
OpenAlexW2140979406

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.