Evidence map›Paper›PMID 23793625›Full record

ArticleApplied and environmental microbiology2013

Population structure of Salmonella enterica serovar 4,[5],12:b:- strains and likely sources of human infection.

Anne Toboldt, Erhard Tietze, Reiner Helmuth, Ernst Junker, Angelika Fruth, Burkhard Malorny

Open access · bronzeAbstract read
In one paragraph

Article in Applied and environmental microbiology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed, 1 pooled it
1.5field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 1 synthesis or guideline pooled it, 13 citations in OpenAlex.

  1. Worldwide Epidemiology ofApplied and environmental microbiology · 2019
    Pooled it
  2. Prevalence and genomic characterization ofFrontiers in microbiology · 2023
    Article
  3. Article
  4. Distribution ofInternational journal of environmental research and public health · 2020
    Article
  5. International journal of environmental research and public health · 2019
    Article
  6. Article
  7. Antimicrobial resistance and typing ofJournal of food science and technology · 2017
    Article
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Anne ToboldtFederal Institute for Risk Assessment, National Reference Laboratory for Salmonella, Berlin, Germany.
Erhard Tietze
Reiner Helmuth
Ernst Junker
Angelika Fruth
Burkhard Malorny
Federal Institute for Risk Assessment · DERobert Koch Institute · DEFreie Universität Berlin · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Salmonella enterica serovar 4,[5],12:b:- is a monophasic serovar not able to express the second-phase flagellar antigen (H2 antigen). In Germany, the serovar is occasionally isolated from poultry, reptiles, fish, food, and humans. In this study, a selection of 67 epidemiologically unrelated Salmonella enterica serovar 4,[5],12:b:- strains isolated in Germany between 2000 and 2011 from the environment, animal, food, and humans was investigated by phenotypic and genotypic methods to better understand the population structure and to identify potential sources of human infections. Strains of this monophasic serovar were highly diverse. Within the 67 strains analyzed, we identified 52 different pulsed-field gel electrophoresis XbaI profiles, 12 different multilocus sequence types (STs), and 18 different pathogenicity array types. The relatedness of strains based on the pathogenicity gene repertoire (102 markers tested) was in good agreement with grouping by MLST. S. enterica serovar 4,[5],12:b:- is distributed across multiple unrelated eBurst groups and consequently is highly polyphyletic. Two sequence types (ST88 and ST127) were linked to S. enterica serovar Paratyphi B (d-tartrate positive), two single-locus variants of ST1583 were linked to S. enterica serovar Abony, and one sequence type (ST1484) was associated with S. enterica serovar Mygdal, a recently defined, new serovar. From the characterization of clinical isolates and those of nonhuman origin, it can be concluded that the potential sources of sporadic human infections with S. enterica serovar 4,[5],12:b:- most likely are mushrooms, shellfish/fish, and poultry.

Indexed as

Genetic VariationAnimalsBacterial Typing TechniquesDNA, BacterialElectrophoresis, Gel, Pulsed-FieldEnvironmental MicrobiologyFood MicrobiologyGermanyHumansMolecular EpidemiologyMolecular Sequence DataMultilocus Sequence TypingPolymerase Chain ReactionSalmonella entericaSalmonella InfectionsSalmonella Infections, AnimalDNA, BacterialVirulence Factors

Identifiers

PMID23793625
PMCPMC3753948
OpenAlexW2156338214

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.