Evidence map›Paper›PMID 23792950›Full record

ArticleGenetics2013

The jaw of the worm: GTPase-activating protein EAT-17 regulates grinder formation in Caenorhabditis elegans.

Sarah Straud, Inhwan Lee, Bomi Song, Leon Avery, Young-Jai You

Abstract read
In one paragraph

Article in Genetics, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

  1. Gut microbes · 2026
    Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Journal of developmental biology · 2020
    Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Developmental genetics of the Caenorhabditis elegans pharynx.Wiley interdisciplinary reviews. Developmental biology
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Sarah StraudDepartment of Molecular Biology, University of Texas Southwestern Medical Center, Dallas, Texas 75390-9148.
Inhwan Lee
Bomi Song
Leon Avery
Young-Jai You

Funding

Enhancing and expanding the CGC Strain CollectionP40OD010440 · OD · UNIVERSITY OF MINNESOTA · PI Ann E. Rougvie · 2012 to 2026
$7.5M
Genetics of nematode pharyngeal muscle excitabilityR37HL046154 · NHLBI · VIRGINIA COMMONWEALTH UNIVERSITY · PI AVERY, LEON · 2004 to 2013
$2.8M
GENETICS OF NEMATODE PHARYNGEAL MUSCLE EXCITABILITYR01HL046154 · NHLBI · UNIVERSITY OF TEXAS SW MED CTR/DALLAS · PI AVERY, LEON · 1991 to 2003
$957k
NHLBI NIH HHS HL46154NHLBI NIH HHS R01 HL046154NHLBI NIH HHS R37 HL046154NIH HHS P40 OD010440
6 · The paper itself

Abstract

Constitutive transport of cellular materials is essential for cell survival. Although multiple small GTPase Rab proteins are required for the process, few regulators of Rabs are known. Here we report that EAT-17, a novel GTPase-activating protein (GAP), regulates RAB-6.2 function in grinder formation in Caenorhabditis elegans. We identified EAT-17 as a novel RabGAP that interacts with RAB-6.2, a protein that presumably regulates vesicle trafficking between Golgi, the endoplasmic reticulum, and plasma membrane to form a functional grinder. EAT-17 has a canonical GAP domain that is critical for its function. RNA interference against 25 confirmed and/or predicted RABs in C. elegans shows that RNAi against rab-6.2 produces a phenotype identical to eat-17. A directed yeast two-hybrid screen using EAT-17 as bait and each of the 25 RAB proteins as prey identifies RAB-6.2 as the interacting partner of EAT-17, confirming that RAB-6.2 is a specific substrate of EAT-17. Additionally, deletion mutants of rab-6.2 show grinder defects identical to those of eat-17 loss-of-function mutants, and both RAB-6.2 and EAT-17 are expressed in the terminal bulb of the pharynx where the grinder is located. Collectively, these results suggest that EAT-17 is a specific GTPase-activating protein for RAB-6.2. Based on the conserved function of Rab6 in vesicular transport, we propose that EAT-17 regulates the turnover rate of RAB-6.2 activity in cargo trafficking for grinder formation.

Indexed as

AnimalsCaenorhabditis elegansCaenorhabditis elegans ProteinsGene DeletionGTPase-Activating ProteinsPharynxProtein BindingProtein Structure, TertiaryProtein Transportrab GTP-Binding ProteinsTransport VesiclesCaenorhabditis elegans ProteinsEAT-17 protein, C elegansGTPase-Activating ProteinsRab6 proteinrab GTP-Binding ProteinsGolgi-endosome traffickinggrinder formationRABRABGAP

Identifiers

PMID23792950
PMCPMC3761295

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.