Evidence map›Paper›PMID 23792809›Full record

ArticleNature communications2013

A small molecule modulates Jumonji histone demethylase activity and selectively inhibits cancer growth.

Lei Wang, Jianjun Chang, Diana Varghese, Michael Dellinger, Subodh Kumar, Anne M Best, Julio Ruiz, Richard Bruick, Samuel Peña-Llopis, Junjie Xu and 7 more

Erratum issuedOpen access · bronzeAbstract read
In one paragraph

Article in Nature communications, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 207 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
207citing papers in PubMed, 1 pooled it
10.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

207 citing papers in PubMed, 1 synthesis or guideline pooled it, 320 citations in OpenAlex.

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147 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

17 authors at 5 institutions in 2 countries.

Lei WangHamon Center for Therapeutic Oncology Research, UT Southwestern Medical Center at Dallas, Dallas, TX 75390, USA.
Jianjun Chang
Diana Varghese
Michael Dellinger
Subodh Kumar
Anne M Best
Julio Ruiz
Richard Bruick
Samuel Peña-Llopis
Junjie Xu
David J Babinski
Doug E Frantz
Rolf A Brekken
Amy M Quinn
Anton Simeonov
Johnny Easmon
Elisabeth D Martinez
The University of Texas Southwestern Medical Center · USSouthwestern Medical CenterNational Institutes of Health · USBiocrates Life Sciences (Austria) · ATThe University of Texas at San Antonio · US

Funding

UNIVERSITY OF TEXAS--SPORE IN LUNG CANCERP50CA070907 · NCI · UT SOUTHWESTERN MEDICAL CENTER · PI GIBBONS, DON LYNN · 1996 to 2024
$57.4M
UT Southwestern Medical Center Simmons Comprehensive Cancer CenterP30CA142543 · NCI · UT SOUTHWESTERN MEDICAL CENTER · PI Sandi Leigh Pruitt · 2010 to 2026
$53.7M
NIH Chemical Genomics CenterZIBTR000004 · NCATS · NATIONAL CENTER FOR ADVANCING TRANSLATIONAL SCIENCES · PI MCKEW, JOHN · 2012 to 2014
$52.3M
Structure guided discovery of small molecule antagonists of Smac (DIABLO)/XIPAP01CA095471 · NCI · UT SOUTHWESTERN MEDICAL CENTER · PI HARRAN, PATRICK G. · 2002 to 2011
$34.1M
EXTRAMURAL RESEARCH FACILITIES CONSTRUCTIONC06RR015437 · NCRR · UNIVERSITY OF TEXAS SW MED CTR/DALLAS · PI ADAMS, PERRIE M · 2000 to 2000
$2.0M
Characterization of the biological activities of novel epigenetic modulatorsR01CA125269 · NCI · UT SOUTHWESTERN MEDICAL CENTER · PI MARTINEZ, ELISABETH D · 2010 to 2014
$1.8M
Characterization of small molecule inhibitors of HDACs and DNMTsK22CA118717 · NCI · UT SOUTHWESTERN MEDICAL CENTER · PI MARTINEZ, ELISABETH D · 2006 to 2009
$458k
Howard Hughes Medical InstituteNCI NIH HHS 1P30 CA142543-01NCI NIH HHS CA095471NCI NIH HHS K22 CA118717NCI NIH HHS K22CA11871703NCI NIH HHS P01 CA095471NCI NIH HHS P30 CA142543NCI NIH HHS P50 CA070907NCI NIH HHS P50-CA70907NCI NIH HHS R01 CA125269NCI NIH HHS R01CA12526901NCRR NIH HHS C06 RR015437NCRR NIH HHS C06 RR 15437-01
6 · The paper itself

Abstract

The pharmacological inhibition of general transcriptional regulators has the potential to block growth through targeting multiple tumorigenic signalling pathways simultaneously. Here, using an innovative cell-based screen, we identify a structurally unique small molecule (named JIB-04) that specifically inhibits the activity of the Jumonji family of histone demethylases in vitro, in cancer cells, and in tumours in vivo. Unlike known inhibitors, JIB-04 is not a competitive inhibitor of α-ketoglutarate. In cancer, but not in patient-matched normal cells, JIB-04 alters a subset of transcriptional pathways and blocks viability. In mice, JIB-04 reduces tumour burden and prolongs survival. Importantly, we find that patients with breast tumours that overexpress Jumonji demethylases have significantly lower survival. Thus, JIB-04, a novel inhibitor of Jumonji demethylases in vitro and in vivo, constitutes a unique potential therapeutic and research tool against cancer, and validates the use of unbiased cellular screens to discover chemical modulators with disease relevance.

Indexed as

AminopyridinesAnimalsAntineoplastic AgentsCell Line, TumorCell ProliferationCell SurvivalDose-Response Relationship, DrugDrug Screening Assays, AntitumorEnzyme InhibitorsEpigenesis, GeneticHistonesHumansHydrazonesInhibitory Concentration 50IsomerismJumonji Domain-Containing Histone DemethylasesAminopyridinesAntineoplastic AgentsEnzyme InhibitorsHistonesHydrazonesJIB-04Jumonji Domain-Containing Histone DemethylasesLysineSmall Molecule Libraries

Identifiers

PMID23792809
PMCPMC3724450
OpenAlexW2056842797

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.