ArticleJournal of the American Medical Informatics Association : JAMIA
Ontology-guided organ detection to retrieve web images of disease manifestation: towards the construction of a consumer-based health image library.
Article in Journal of the American Medical Informatics Association : JAMIA. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.
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Who cites it
5 citing papers in PubMed, 7 citations in OpenAlex.
- TrhOnt: building an ontology to assist rehabilitation processes.Journal of biomedical semantics · 2016Article
- Towards precision medicine-based therapies for glioblastoma: interrogating human disease genomics and mouse phenotypes.BMC genomics · 2016Article
- Trends in biomedical informatics: automated topic analysis of JAMIA articles.Journal of the American Medical Informatics Association : JAMIA · 2015Article
- A hierarchical knowledge-based approach for retrieving similar medical images described with semantic annotations.Journal of biomedical informatics · 2014Article
- Biomedical imaging informatics in the era of precision medicine: progress, challenges, and opportunities.Journal of the American Medical Informatics Association : JAMIAArticle
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Authors and funding
4 authors at 3 institutions in 1 country.
Funding
Abstract
backgroundVisual information is a crucial aspect of medical knowledge. Building a comprehensive medical image base, in the spirit of the Unified Medical Language System (UMLS), would greatly benefit patient education and self-care. However, collection and annotation of such a large-scale image base is challenging.
objectiveTo combine visual object detection techniques with medical ontology to automatically mine web photos and retrieve a large number of disease manifestation images with minimal manual labeling effort.
methodsAs a proof of concept, we first learnt five organ detectors on three detection scales for eyes, ears, lips, hands, and feet. Given a disease, we used information from the UMLS to select affected body parts, ran the pretrained organ detectors on web images, and combined the detection outputs to retrieve disease images.
resultsCompared with a supervised image retrieval approach that requires training images for every disease, our ontology-guided approach exploits shared visual information of body parts across diseases. In retrieving 2220 web images of 32 diseases, we reduced manual labeling effort to 15.6% while improving the average precision by 3.9% from 77.7% to 81.6%. For 40.6% of the diseases, we improved the precision by 10%.
conclusionsThe results confirm the concept that the web is a feasible source for automatic disease image retrieval for health image database construction. Our approach requires a small amount of manual effort to collect complex disease images, and to annotate them by standard medical ontology terms.
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.