Evidence map›Paper›PMID 23792115›Full record

ArticleDevelopmental biology2013

optix functions as a link between the retinal determination network and the dpp pathway to control morphogenetic furrow progression in Drosophila.

Yumei Li, Yuwei Jiang, Yiyun Chen, Umesh Karandikar, Kristi Hoffman, Abanti Chattopadhyay, Graeme Mardon, Rui Chen

Abstract read
In one paragraph

Article in Developmental biology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 28 citations in OpenAlex.

  1. SIX3 as a Regulator of Development and Disease.Journal of developmental biology · 2026
    Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. The fly eye: Through the looking glass.Developmental dynamics : an official publication of the American Association of Anatomists · 2018
    Review
  8. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Yumei LiDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77303, USA.
Yuwei Jiang
Yiyun Chen
Umesh Karandikar
Kristi Hoffman
Abanti Chattopadhyay
Graeme Mardon
Rui Chen
Baylor College of Medicine · US

Funding

Retinal Cell-Fate Determination and Pattern FormationR01EY011232 · NEI · BAYLOR COLLEGE OF MEDICINE · PI MARDON, GRAEME · 1996 to 2019
$6.1M
Genome-wide Dissection of the Retinal Determination NetworkR01EY016853 · NEI · BAYLOR COLLEGE OF MEDICINE · PI CHEN, RUI · 2005 to 2009
$1.5M
NEI NIH HHS EY011232NEI NIH HHS R01 EY011232NEI NIH HHS R01 EY016853NEI NIH HHS R01EY016853
6 · The paper itself

Abstract

optix, the Drosophila ortholog of the SIX3/6 gene family in vertebrate, encodes a homeodomain protein with a SIX protein-protein interaction domain. In vertebrates, Six3/6 genes are required for normal eye as well as brain development. However, the normal function of optix in Drosophila remains unknown due to lack of loss-of-function mutation. Previous studies suggest that optix is likely to play an important role as part of the retinal determination (RD) network. To elucidate normal optix function during retinal development, multiple null alleles for optix have been generated. Loss-of-function mutations in optix result in lethality at the pupae stage. Surprisingly, close examination of its function during eye development reveals that, unlike other members of the RD network, optix is required only for morphogenetic furrow (MF) progression, but not initiation. The mechanisms by which optix regulates MF progression is likely through regulation of signaling molecules in the furrow. Specifically, although unaffected during MF initiation, expression of dpp in the MF is dramatically reduced in optix mutant clones. In parallel, we find that optix is regulated by sine oculis and eyes absent, key members of the RD network. Furthermore, positive feedback between optix and sine oculis and eyes absent is observed, which is likely mediated through dpp signaling pathway. Together with the observation that optix expression does not depend on hh or dpp, we propose that optix functions together with hh to regulate dpp in the MF, serving as a link between the RD network and the patterning pathways controlling normal retinal development.

Indexed as

AllelesAnimalsBody PatterningDrosophila melanogasterDrosophila ProteinsGene DeletionGene Expression Regulation, DevelopmentalHedgehog ProteinsHomeodomain ProteinsMutationPhotoreceptor Cells, InvertebrateRetinaSignal TransductionTranscription Factorsdpp protein, DrosophilaDrosophila ProteinsHedgehog Proteinshh protein, DrosophilaHomeodomain ProteinsOptix protein, DrosophilaTranscription FactorsdppMorphogenic furrowoptixRetinal determination networkRetinal development

Identifiers

PMID23792115
PMCPMC3742619
OpenAlexW1995506404

What OpenQuestion holds

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LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.