Evidence map›Paper›PMID 23792096›Full record

ArticleBiochemical and biophysical research communications2013

Crystallographic study of multi-drug resistant HIV-1 protease lopinavir complex: mechanism of drug recognition and resistance.

Zhigang Liu, Ravikiran S Yedidi, Yong Wang, Tamaria G Dewdney, Samuel J Reiter, Joseph S Brunzelle, Iulia A Kovari, Ladislau C Kovari

Abstract read
In one paragraph

Article in Biochemical and biophysical research communications, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.9field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 11 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Zhigang LiuDepartment of Biochemistry and Molecular Biology, Wayne State University School of Medicine, Detroit, MI 48201, United States.
Ravikiran S Yedidi
Yong Wang
Tamaria G Dewdney
Samuel J Reiter
Joseph S Brunzelle
Iulia A Kovari
Ladislau C Kovari
Wayne State University · USNorthwestern University · US

Funding

PROTEASE INHIBITOR DESIGN AGAINST MDR HIV VARIANTSR21AI065294 · NIAID · WAYNE STATE UNIVERSITY · PI KOVARI, LADISLAU CHRISTOPHER · 2005 to 2006
$398k
NIAID NIH HHS AI65294NIAID NIH HHS R21 AI065294
6 · The paper itself

Abstract

Lopinavir (LPV) is a second generation HIV-1 protease inhibitor. Drug resistance has rapidly emerged against LPV since its US FDA approval on September 15, 2000. Mutations at residues 32I, L33F, 46I, 47A, I54V, V82A, I84V, and L90M render the protease drug resistant against LPV. We report the crystal structure of a clinical isolate multi-drug resistant (MDR) 769 HIV-1 protease (resistant mutations at residues 10, 36, 46, 54, 62, 63, 71, 82, 84, and 90) complexed with LPV and the in vitro enzymatic IC50 of LPV against MDR 769. The structural and functional studies demonstrate significant drug resistance of MDR 769 against LPV, arising from reduced interactions between LPV and the protease target.

Indexed as

Crystallography, X-RayDrug Resistance, ViralHIV ProteaseHIV Protease InhibitorsHydrogen BondingLopinavirModels, MolecularHIV ProteaseHIV Protease InhibitorsLopinavirp16 protease, Human immunodeficiency virus 1HAARThalf maximal inhibitory concentrationhighly active anti-retroviral therapyHIV-1 proteaseIC50lopinavirLopinavirLPVMDRmulti-drug resistanceMulti-drug resistanceRMSDroot mean square deviationX-ray crystallography

Identifiers

PMID23792096
PMCPMC4520426
OpenAlexW2063439816

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.