Evidence map›Paper›PMID 23791831›Full record

ArticleJournal of structural biology2013

Water in the formation of biogenic minerals: peeling away the hydration layers.

Jason R Dorvee, Arthur Veis

Abstract read
In one paragraph

Article in Journal of structural biology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. In Vitro Mineralization of Collagen.Advanced materials (Deerfield Beach, Fla.) · 2021
    Review
  11. Article
  12. Article
  13. Review
  14. The Mineral-Collagen Interface in Bone.Calcified tissue international · 2015
    Review
  15. Article
  16. Review
  17. Article
  18. Review
  19. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Jason R DorveeNorthwestern University, Feinberg School of Medicine, Chicago, IL 60611, USA.
Arthur Veis

Funding

MATRIX COMPONENT INTERACTIONS IN BONE, DENTIN AND INVERTEBRATE MINERALR01DE001374 · NIDCR · NORTHWESTERN UNIVERSITY AT CHICAGO · PI ALVARES, KEITH, STOCK, STUART R · 1985 to 2013
$4.6M
Intramural NIH HHSNIDCR NIH HHS R01 DE001374NIDCR NIH HHS R01-DE001374-53
6 · The paper itself

Abstract

Minerals of biogenic origin form and crystallize from aqueous environments at ambient temperatures and pressures. The in vivo environment either intracellular or intercellular, contains many components that modulate both the activity of the ions which associate to form the mineral, as well as the activity and structure of the crowded water. Most of the studies about the mechanism of mineralization, that is, the detailed pathways by which the mineral ions proceed from solution to crystal state, have been carried out in relatively dilute solutions and clean solutions. These studies have considered both thermodynamic and kinetic controls. Most have not considered the water itself. Is the water a passive bystander, or is it intimately a participant in the mineral ion densification reaction? A wide range of experiments show that the mineralization pathways proceed through a series of densification stages with intermediates, such as a "dense liquid" phase and the prenucleation clusters that form within it. This is in contrast to the idea of a single step phase transition, but consistent with the Gibbs concept of discontinuous phase transitions from supersaturated mother liquor to crystal. Further changes in the water structure at every surface and interface during densification guides the free energy trajectory leading to the crystalline state. In vertebrates, mineralization takes place in a hydrated collagen matrix, thus water must be considered as a direct participant. Although different in detail, the crystallization of calcium phosphates, as apatite, and calcium carbonates, as calcite, are mechanistically identical from the viewpoint of water.

Indexed as

Calcification, PhysiologicApatitesCalcium CarbonateCalcium PhosphatesCollagenCrystallizationWaterApatitesCalcium Carbonatecalcium phosphateCalcium PhosphatesCollagenWaterApatiteCalciteCollagenHydration layersMineralizationWater

Identifiers

PMID23791831
PMCPMC3938164

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.