Evidence map›Paper›PMID 23791193›Full record

ArticleNeuron2013

Recombinant probes for visualizing endogenous synaptic proteins in living neurons.

Garrett G Gross, Jason A Junge, Rudy J Mora, Hyung-Bae Kwon, C Anders Olson, Terry T Takahashi, Emily R Liman, Graham C R Ellis-Davies, Aaron W McGee, Bernardo L Sabatini and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in Neuron, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 222 papers.

0numbers the graph read from it
0cells of the map it votes in
222citing papers in PubMed
10.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

222 citing papers in PubMed, 360 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
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  9. Article
  10. Article
  11. Review
  12. Article
  13. Liquid-liquid phase separation in neural development.Cellular and molecular life sciences : CMLS · 2026
    Review
  14. Article
  15. Article
  16. Article
  17. Circular RNAScience advances · 2026
    Article
  18. Article
  19. Article
  20. Article

162 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

12 authors at 6 institutions in 1 country.

Garrett G GrossDepartment of Chemistry, University of Southern California, Los Angeles, CA 90089, USA.
Jason A Junge
Rudy J Mora
Hyung-Bae Kwon
C Anders Olson
Terry T Takahashi
Emily R Liman
Graham C R Ellis-Davies
Aaron W McGee
Bernardo L Sabatini
Richard W Roberts
Don B Arnold
University of Southern California · USChildren's Hospital of Los Angeles · USHarvard University · USHoward Hughes Medical Institute · USIcahn School of Medicine at Mount Sinai · USUniversity of California, Los Angeles · US

Funding

PHOTOCHEMICAL REGULATION OF CALCIUM IN CELL PHYSIOLOGYR01GM053395 · NIGMS · OREGON HEALTH AND SCIENCE UNIVERSITY · PI ELLIS-DAVIES, GRAHAM · 1995 to 2020
$6.1M
Dendritic Ca signals in striatal medium spiny neuronsR01NS046579 · NINDS · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI SABATINI, BERNARDO L · 2004 to 2016
$5.0M
Action and interaction of ionotropic and metabotropic neurotransmissionR37NS046579 · NINDS · HARVARD MEDICAL SCHOOL · PI SABATINI, BERNARDO L · 2018 to 2024
$4.6M
Optical probes for controlling cellular functionR01NS069720 · NINDS · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI ELLIS-DAVIES, GRAHAM · 2010 to 2017
$3.2M
IN VITRO SELECTION OF PROTEINS VIA MRNA-PROTEIN FUSIONSR01GM060416 · NIGMS · UNIVERSITY OF SOUTHERN CALIFORNIA · PI ROBERTS, RICHARD W · 2000 to 2010
$2.9M
Polypeptide Design with Proteomic Scope via Microfluidic mRNA DisplayR01AI085583 · NIAID · UNIVERSITY OF SOUTHERN CALIFORNIA · PI ROBERTS, RICHARD W, SOH, HYONGSOK TOM · 2009 to 2013
$2.4M
Subcellular targeting of light-responsive opsins for mapping and manipulating neuR01MH086381 · NIMH · UNIVERSITY OF SOUTHERN CALIFORNIA · PI ARNOLD, DONALD B · 2009 to 2013
$2.0M
Molecular probes to visualize endogenous synaptic proteins in vivoR01NS081678 · NINDS · UNIVERSITY OF SOUTHERN CALIFORNIA · PI ARNOLD, DONALD B · 2013 to 2017
$1.8M
SUPR Peptides to Inhibit Undruggable Cancer Target (PQ18)R01CA170820 · NCI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI ROBERTS, RICHARD W, TAKAHASHI, TERRY TORAO · 2012 to 2015
$1.8M
Genetically encoded probes for visualizing neuronal structure and functionR01GM083898 · NIGMS · UNIVERSITY OF SOUTHERN CALIFORNIA · PI ARNOLD, DONALD B, ROBERTS, RICHARD W · 2008 to 2011
$1.2M
Howard Hughes Medical InstituteNCI NIH HHS R01 CA170820NIAID NIH HHS R01 AI085583NIGMS NIH HHS GM 060416NIGMS NIH HHS GM-083898NIGMS NIH HHS GM53395NIGMS NIH HHS R01 GM053395NIGMS NIH HHS R01 GM060416NIGMS NIH HHS R01 GM083898NIH HHS OD 006117NIMH NIH HHS MH-086381NIMH NIH HHS R01 MH086381NINDS NIH HHS NS-046579NINDS NIH HHS NS69720NINDS NIH HHS R01 NS046579NINDS NIH HHS R01 NS069720NINDS NIH HHS R01 NS081678NINDS NIH HHS R37 NS046579
6 · The paper itself

Abstract

The ability to visualize endogenous proteins in living neurons provides a powerful means to interrogate neuronal structure and function. Here we generate recombinant antibody-like proteins, termed Fibronectin intrabodies generated with mRNA display (FingRs), that bind endogenous neuronal proteins PSD-95 and Gephyrin with high affinity and that, when fused to GFP, allow excitatory and inhibitory synapses to be visualized in living neurons. Design of the FingR incorporates a transcriptional regulation system that ties FingR expression to the level of the target and reduces background fluorescence. In dissociated neurons and brain slices, FingRs generated against PSD-95 and Gephyrin did not affect the expression patterns of their endogenous target proteins or the number or strength of synapses. Together, our data indicate that PSD-95 and Gephyrin FingRs can report the localization and amount of endogenous synaptic proteins in living neurons and thus may be used to study changes in synaptic strength in vivo.

Indexed as

AnimalsCarrier ProteinsChlorocebus aethiopsCOS CellsDisks Large Homolog 4 ProteinGene Expression ProfilingIntracellular Signaling Peptides and ProteinsMembrane ProteinsNerve Tissue ProteinsNeuronsRecombinant ProteinsSynapsesCarrier ProteinsDisks Large Homolog 4 ProteinDLG4 protein, humangephyrinIntracellular Signaling Peptides and ProteinsMembrane ProteinsNerve Tissue ProteinsRecombinant Proteins

Identifiers

PMID23791193
PMCPMC3779638
OpenAlexW2021512296

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.