Evidence map›Paper›PMID 23788639›Full record

ArticleThe Journal of biological chemistry2013

Arabidopsis ferritin 1 (AtFer1) gene regulation by the phosphate starvation response 1 (AtPHR1) transcription factor reveals a direct molecular link between iron and phosphate homeostasis.

Marc Bournier, Nicolas Tissot, Stéphane Mari, Jossia Boucherez, Eric Lacombe, Jean-François Briat, Frédéric Gaymard

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 72 papers.

0numbers the graph read from it
0cells of the map it votes in
72citing papers in PubMed
14.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

72 citing papers in PubMed, 161 citations in OpenAlex.

  1. Trial
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  14. Functional plasticity ofAoB PLANTS · 2022
    Article
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12 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Marc BournierLaboratoire de Biochimie et Physiologie Moleculaire des Plantes, UMR 5004, Agro-M/CNRS/Institut National de la Recherche Agronomique/Universite Montpelier II, 34060 Montpellier Cedex 1, France.
Nicolas Tissot
Stéphane Mari
Jossia Boucherez
Eric Lacombe
Jean-François Briat
Frédéric Gaymard
Institut des Sciences des Plantes de Montpellier · FRAgropolis International · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A yeast one-hybrid screening allowed the selection of PHR1 as a factor that interacted with the AtFer1 ferritin gene promoter. In mobility shift assays, PHR1 and its close homologue PHL1 (PHR1-like 1) interact with Element 2 of the AtFer1 promoter, containing a P1BS (PHR1 binding site). In a loss of function mutant for genes encoding PHR1 and PHL1 (phr1 phl1 mutant), the response of AtFer1 to phosphate starvation was completely lost, showing that the two transcription factors regulate AtFer1 expression upon phosphate starvation. This regulation does not involve the IDRS (iron-dependent regulatory sequence) present in the AtFer1 promoter and involved in the iron-dependent regulation. The phosphate starvation response of AtFer1 is not linked to the iron status of plants and is specifically initiated by phosphate deficiency. Histochemical localization of iron, visualized by Perls DAB staining, was strongly altered in a phr1 phl1 mutant, revealing that both PHR1 and PHL1 are major factors involved in the regulation of iron homeostasis.

Indexed as

Gene Expression Regulation, PlantGenes, PlantHomeostasisArabidopsisArabidopsis ProteinsFerritinsIronPhosphatesPromoter Regions, GeneticSignal TransductionTranscription FactorsArabidopsis ProteinsFerritinsIronPhosphatesPHR1 protein, ArabidopsisTranscription FactorsIronIron MetabolismMetal HomeostasisPlantRedox

Identifiers

PMID23788639
PMCPMC3829352
OpenAlexW2153221299

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.