Evidence map›Paper›PMID 23788626›Full record

ArticleGenes & development2013

Sex-lethal promotes nuclear retention of msl2 mRNA via interactions with the STAR protein HOW.

Antoine Graindorge, Clément Carré, Fátima Gebauer

Abstract read
In one paragraph

Article in Genes & development, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Genomic and functional conservation of lncRNAs: lessons from flies.Mammalian genome : official journal of the International Mammalian Genome Society · 2022
    Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. RNA (New York, N.Y.) · 2018
    Article
  10. Article
  11. Review
  12. Differential intron retention inScience advances · 2017
    Article
  13. Review
  14. Review
  15. Article
  16. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Antoine GraindorgeGene Regulation, Stem Cells, and Cancer Programme, Centre for Genomic Regulation (CRG), 08003 Barcelona, Spain.
Clément Carré
Fátima Gebauer

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Female-specific repression of male-specific-lethal-2 (msl2) mRNA in Drosophila melanogaster provides a paradigm for coordinated control of gene expression by RNA-binding complexes. Repression is orchestrated by Sex-lethal (SXL), which binds to the 5' and 3' untranslated regions (UTRs) of the mRNA and inhibits splicing in the nucleus and subsequent translation in the cytoplasm. Here we show that SXL ensures msl2 silencing by yet a third mechanism that involves inhibition of nucleocytoplasmic transport of msl2 mRNA. To identify SXL cofactors in msl2 regulation, we devised a two-step purification method termed GRAB (GST pull-down and RNA affinity binding) and identified Held-Out-Wings (HOW) as a component of the msl2 5' UTR-associated complex. HOW directly interacts with SXL and binds to two sequence elements in the msl2 5' UTR. Depletion of HOW reduces the capacity of SXL to repress the expression of msl2 reporters without affecting SXL-mediated regulation of splicing or translation. Instead, HOW is required for SXL to retain msl2 transcripts in the nucleus. Cooperation with SXL confers a sex-specific role to HOW. Our results uncover a novel function of SXL in nuclear mRNA retention and identify HOW as a mediator of this function.

Indexed as

5' Untranslated RegionsAnimalsCell NucleusDNA-Binding ProteinsDrosophila melanogasterDrosophila ProteinsFemaleGene Expression Regulation, DevelopmentalLarvaMaleNuclear ProteinsProtein BindingRNA-Binding ProteinsRNA, MessengerTranscription Factors5' Untranslated RegionsDNA-Binding ProteinsDrosophila Proteinshow protein, Drosophilamsl-2 protein, DrosophilaNuclear ProteinsRNA-Binding ProteinsRNA, MessengerTranscription FactorsHeld-Out-Wingsmsl2nuclear mRNA retentionSex-lethal

Identifiers

PMID23788626
PMCPMC3701196

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.