ArticleFrontiers in microbiology2013
Insights into fungal communities in composts revealed by 454-pyrosequencing: implications for human health and safety.
Article in Frontiers in microbiology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.
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Who cites it
26 citing papers in PubMed.
- Diatomite-Mediated Humification and Fungal Community Succession During Composting.Microorganisms · 2026Article
- Agronomic Efficiency of Compost Extracts and Nitrogen-Fixing Bacteria in Soybean Crops.Microorganisms · 2025Article
- Phylogenetic assessment and taxonomic revision ofIMA fungus · 2025Article
- Fungal Colonization of the Airways of Patients with Cystic Fibrosis: the Role of the Environmental Reservoirs.Mycopathologia · 2024Review
- The addition of sawdust reduced the emission of nitrous oxide in pig manure composting by altering the bacterial community structure and functions.Environmental science and pollution research international · 2022Article
- Organic Amendments Alter Soil Hydrology and Belowground Microbiome of Tomato (Microorganisms · 2021Article
- Role of Leaf Litter in Above-Ground Wood Decay.Microorganisms · 2020Article
- Grand Challenges in Microbiotechnology: Through the Prism of Microbiotechnology.Frontiers in microbiology · 2020Article
- Effect of Composting Under Semipermeable Film on the Sewage Sludge Virome.Microbial ecology · 2019Article
- Article
- Microbial Community Succession and Response to Environmental Variables During Cow Manure and Corn Straw Composting.Frontiers in microbiology · 2019Article
- Draft Genome Sequence of Scytalidium lignicola DSM 105466, a Ubiquitous Saprotrophic Fungus.Microbiology resource announcements · 2018Article
- Defining functional diversity for lignocellulose degradation in a microbial community using multi-omics studies.Biotechnology for biofuels · 2018Article
- Ignored fungal community in activated sludge wastewater treatment plants: diversity and altitudinal characteristics.Environmental science and pollution research international · 2017Article
- Fungal Diversity in Tomato Rhizosphere Soil under Conventional and Desert Farming Systems.Frontiers in microbiology · 2017Article
- Fungal and bacterial successions in the process of co-composting of organic wastes as revealed by 454 pyrosequencing.PloS one · 2017Article
- Fungal Community Assembly in the Amazonian Dark Earth.Microbial ecology · 2016Article
- Microbial Profiling of a Suppressiveness-Induced Agricultural Soil Amended with Composted Almond Shells.Frontiers in microbiology · 2016Article
- Article
- Microbiota Characterization of Compost Using Omics Approaches Opens New Perspectives for Phytophthora Root Rot Control.PloS one · 2016Article
Corrections and comments
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Authors and funding
3 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Fungal community composition in composts of lignocellulosic wastes was assessed via 454-pyrosequencing of ITS1 libraries derived from the three major composting phases. Ascomycota represented most (93%) of the 27,987 fungal sequences. A total of 102 genera, 120 species, and 222 operational taxonomic units (OTUs; >97% similarity) were identified. Thirty genera predominated (ca. 94% of the sequences), and at the species level, sequences matching Chaetomium funicola and Fusarium oxysporum were the most abundant (26 and 12%, respectively). In all composts, fungal diversity in the mature phase exceeded that of the mesophilic phase, but there was no consistent pattern in diversity changes occurring in the thermophilic phase. Fifteen species of human pathogens were identified, eight of which have not been previously identified in composts. This study demonstrated that deep sequencing can elucidate fungal community diversity in composts, and that this information can have important implications for compost use and human health.
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