Evidence map›Paper›PMID 23785299›Full record

ArticlePLoS genetics2013

NSAIDs modulate clonal evolution in Barrett's esophagus.

Rumen L Kostadinov, Mary K Kuhner, Xiaohong Li, Carissa A Sanchez, Patricia C Galipeau, Thomas G Paulson, Cassandra L Sather, Amitabh Srivastava, Robert D Odze, Patricia L Blount and 3 more

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 48 papers.

0numbers the graph read from it
0cells of the map it votes in
48citing papers in PubMed
9.3field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

48 citing papers in PubMed, 66 citations in OpenAlex.

  1. Review
  2. Review
  3. Review
  4. Resolving tumor evolution: a phylogenetic approach.Journal of the National Cancer Center · 2024
    Review
  5. Review
  6. Unboxing the molecular modalities of mutagens in cancer.Environmental science and pollution research international · 2022
    Review
  7. Review
  8. Review
  9. Article
  10. Review
  11. Review
  12. Review
  13. Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. The metaplastic mosaic of Barrett's oesophagus.Virchows Archiv : an international journal of pathology · 2018
    Review
  19. Review
  20. Advances in antitumor effects of NSAIDs.Cancer management and research · 2018
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 5 institutions in 1 country.

Rumen L KostadinovGenomics and Computational Biology Graduate Program, University of Pennsylvania, Philadelphia, Pennsylvania, USA.
Mary K Kuhner
Xiaohong Li
Carissa A Sanchez
Patricia C Galipeau
Thomas G Paulson
Cassandra L Sather
Amitabh Srivastava
Robert D Odze
Patricia L Blount
Thomas L Vaughan
Brian J Reid
Carlo C Maley
Fred Hutch Cancer Center · USHarvard University · USUniversity of Washington · USJohns Hopkins University · USUCSF Helen Diller Family Comprehensive Cancer Center · US

Funding

PHYLOGENIES of Barrett's Esophagus LineagesP01CA091955 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI GRADY, WILLIAM MALLORY · 2002 to 2019
$35.9M
Modeling Neoplastic Progression in Barrett's Esophagus - Renewal -2R01CA140657 · NCI · WISTAR INSTITUTE · PI Carlo Maley · 2009 to 2026
$5.0M
Stem Cells, Differentiation and Therapeutic Resistance in AMLR01CA149566 · NCI · UNIVERSITY OF PENNSYLVANIA · PI CARROLL, MARTIN · 2011 to 2015
$3.0M
Predictors of Progression from Barrett's Esophagus to esophageal adenocarcinomaRC1CA146973 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI REID, BRIAN J · 2009 to 2010
$998k
An Intra-Neoplasm Genetic Diversity AssayR03CA137811 · NCI · WISTAR INSTITUTE · PI MALEY, CARLO · 2008 to 2009
$163k
NCI NIH HHS P01 CA091955NCI NIH HHS P01 CA91955NCI NIH HHS R01 CA140657NCI NIH HHS R01 CA149566NCI NIH HHS R03 CA137811NCI NIH HHS RC1 CA146973
6 · The paper itself

Abstract

Cancer is considered an outcome of decades-long clonal evolution fueled by acquisition of somatic genomic abnormalities (SGAs). Non-steroidal anti-inflammatory drugs (NSAIDs) have been shown to reduce cancer risk, including risk of progression from Barrett's esophagus (BE) to esophageal adenocarcinoma (EA). However, the cancer chemopreventive mechanisms of NSAIDs are not fully understood. We hypothesized that NSAIDs modulate clonal evolution by reducing SGA acquisition rate. We evaluated thirteen individuals with BE. Eleven had not used NSAIDs for 6.2±3.5 (mean±standard deviation) years and then began using NSAIDs for 5.6±2.7 years, whereas two had used NSAIDs for 3.3±1.4 years and then discontinued use for 7.9±0.7 years. 161 BE biopsies, collected at 5-8 time points over 6.4-19 years, were analyzed using 1Million-SNP arrays to detect SGAs. Even in the earliest biopsies there were many SGAs (284±246 in 10/13 and 1442±560 in 3/13 individuals) and in most individuals the number of SGAs changed little over time, with both increases and decreases in SGAs detected. The estimated SGA rate was 7.8 per genome per year (95% support interval [SI], 7.1-8.6) off-NSAIDs and 0.6 (95% SI 0.3-1.5) on-NSAIDs. Twelve individuals did not progress to EA. In ten we detected 279±86 SGAs affecting 53±30 Mb of the genome per biopsy per time point and in two we detected 1,463±375 SGAs affecting 180±100 Mb. In one individual who progressed to EA we detected a clone having 2,291±78 SGAs affecting 588±18 Mb of the genome at three time points in the last three of 11.4 years of follow-up. NSAIDs were associated with reduced rate of acquisition of SGAs in eleven of thirteen individuals. Barrett's cells maintained relative equilibrium level of SGAs over time with occasional punctuations by expansion of clones having massive amount of SGAs.

Indexed as

AdenocarcinomaAgedAnti-Inflammatory Agents, Non-SteroidalBarrett EsophagusBiopsyClonal EvolutionDisease ProgressionFemaleGenomic InstabilityHumansMaleMiddle AgedPhylogenyPolymorphism, Single NucleotideAnti-Inflammatory Agents, Non-Steroidal

Identifiers

PMID23785299
PMCPMC3681672
OpenAlexW2096826039

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.