Evidence map›Paper›PMID 23785055›Full record

ArticleDevelopment (Cambridge, England)2013

TIE-DYE: a combinatorial marking system to visualize and genetically manipulate clones during development in Drosophila melanogaster.

Melanie I Worley, Linda Setiawan, Iswar K Hariharan

Abstract read
In one paragraph

Article in Development (Cambridge, England), 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 50 papers.

0numbers the graph read from it
0cells of the map it votes in
50citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

50 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
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  11. Article
  12. Article
  13. Imaginal Disc Regeneration: Something Old, Something New.Cold Spring Harbor perspectives in biology · 2022
    Review
  14. Article
  15. The wing imaginal disc.Genetics · 2022
    Article
  16. Review
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Melanie I WorleyDepartment of Molecular and Cell Biology, University of California, Berkeley, Berkeley, CA 94720-3200, USA.
Linda Setiawan
Iswar K Hariharan

Funding

REGULATION OF CELL AND ORGAN SIZE IN VIVOR01GM061672 · NIGMS · UNIVERSITY OF CALIFORNIA BERKELEY · PI HARIHARAN, ISWAR K. · 2000 to 2017
$4.5M
Identifying novel strategies to promote tissue regenerationR01GM085576 · NIGMS · UNIVERSITY OF CALIFORNIA BERKELEY · PI HARIHARAN, ISWAR K. · 2008 to 2016
$2.4M
NIGMS NIH HHS R01 GM061672NIGMS NIH HHS R01 GM085576NIGMS NIH HHS R01 GM61672NIGMS NIH HHS R01 GM85576
6 · The paper itself

Abstract

Two types of information are particularly valuable in understanding the development of a tissue or an organ from a small population of founder cells. First, it is useful to know the composition of the final structure in terms the contribution of individual founder cells. Second, it is important to understand cell-cell interactions. To facilitate the study of both of these aspects of organ development at a tissue-wide level, we have developed a method, TIE-DYE, that allows simultaneous lineage tracing of multiple cell populations as well as the genetic manipulation of a subset of these populations. Seven uniquely marked categories of cells are produced by site-directed recombination of three independent cassettes. We have used the TIE-DYE method to estimate the number of founder cells that give rise to the wing-imaginal disc during normal development and following compensatory growth caused by X-ray irradiation of the founder cells. We also show that four out of the seven types of marked clones can be genetically manipulated by gene overexpression or RNAi knockdown, allowing an assessment of the consequences of these manipulations on the entire wing disc. We demonstrate the utility of this system in studying the consequences of alterations in growth, patterning and cell-cell affinity.

Indexed as

Genetic TechniquesAnimalsAnimals, Genetically ModifiedBody PatterningCell LineageClone CellsDrosophila melanogasterDrosophila ProteinsFemaleGene Expression Regulation, DevelopmentalGreen Fluorescent ProteinsImaginal DiscsLuminescent ProteinsMaleRed Fluorescent ProteinTranscription FactorsDrosophila ProteinsGAL4 protein, DrosophilaGreen Fluorescent ProteinsLuminescent ProteinsRed Fluorescent ProteinTranscription FactorsDrosophilaImaginal discMulticolor lineage technique

Identifiers

PMID23785055
PMCPMC3931737

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.