Evidence map›Paper›PMID 23780840›Full record

ArticleProtein science : a publication of the Protein Society2013

Development of a fluorescent monoclonal antibody-based assay to measure the allosteric effects of synthetic peptides on self-oligomerization of AGR2 protein.

Terry A Gray, Euan Murray, Matthew W Nowicki, Lucy Remnant, Alexander Scherl, Petr Muller, Borek Vojtesek, Ted R Hupp

Abstract read
In one paragraph

Article in Protein science : a publication of the Protein Society, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.3field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 21 citations in OpenAlex.

  1. Review
  2. Article
  3. Non-canonical roles of canonical telomere binding proteins in cancers.Cellular and molecular life sciences : CMLS · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 3 countries.

Terry A GrayInstitute of Genetics and Molecular Medicine, Cell Signaling Unit, University of Edinburgh, United Kingdom.
Euan Murray
Matthew W Nowicki
Lucy Remnant
Alexander Scherl
Petr Muller
Borek Vojtesek
Ted R Hupp
University of Edinburgh · GBMasaryk Memorial Cancer Institute · CZMRC Institute of Genetics and Molecular Medicine · GBUniversity of Geneva · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Many regulatory proteins are homo-oligomeric and designing assays that measure self-assembly will provide novel approaches to study protein allostery and screen for novel small molecule modulators of protein interactions. We present an assay to begin to define the biochemical determinants that regulate dimerization of the cancer-associated oncoprotein AGR2. A two site-sandwich microtiter assay ((2S) MTA) was designed using a DyLight800-labeled monoclonal antibody that binds to an epitope in AGR2 to screen for synthetic self-peptides that might regulate dimer stability. Peptides derived from the intrinsically disordered N-terminal region of AGR2 increase in trans oligomer stability as defined using the (2S) MTA assay. A DSS-crosslinking assay that traps the AGR2 dimer through K95-K95 adducts confirmed that Δ45-AGR2 was a more stable dimer using denaturing gel electrophoresis. A titration of wt-AGR2, Δ45-AGR2 (more stable dimer), and monomeric AGR2(E60A) revealed that Δ45-AGR2 was more active in binding to Reptin than either wt-AGR2 or the AGR2(E60A) mutant. Our data have defined a functional role for the AGR2 dimer in the binding to its most well characterized interacting protein, Reptin. The ability to regulate AGR2 oligomerization in trans opens the possibility for developing small molecules that regulate its' biochemical activity as potential cancer therapeutics. The data also highlight the utility of this oligomerization assay to screen chemical libraries for ligands that could regulate AGR2 dimer stability and its' oncogenic potential.

Indexed as

Allosteric RegulationAmino Acid SequenceAntibodies, MonoclonalATPases Associated with Diverse Cellular ActivitiesCarrier ProteinsDNA HelicasesEnzyme-Linked Immunosorbent AssayFluorescenceFluorescent Antibody TechniqueFluorescent DyesHumansLigandsModels, MolecularMolecular Sequence DataMucoproteinsOncogene ProteinsAGR2 protein, humanAntibodies, MonoclonalATPases Associated with Diverse Cellular ActivitiesCarrier ProteinsDNA HelicasesFluorescent DyesLigandsMucoproteinsOncogene ProteinsProteinsRUVBL2 protein, humanallosterymonoclonal antibodyoligomerizationprotein interactions

Identifiers

PMID23780840
PMCPMC3776338
OpenAlexW2171319435

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.