Evidence map›Paper›PMID 23777767›Full record

ArticleBlood2013

RNAi screen identifies Jarid1b as a major regulator of mouse HSC activity.

Sonia Cellot, Kristin J Hope, Jalila Chagraoui, Martin Sauvageau, Éric Deneault, Tara MacRae, Nadine Mayotte, Brian T Wilhelm, Josette R Landry, Stephen B Ting and 4 more

Open access · bronzeAbstract read
In one paragraph

Article in Blood, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
3.7field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed, 64 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. A PRC2-Kdm5b axis sustains tumorigenicity of acute myeloid leukemia.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  7. Review
  8. Growing and aging of hematopoietic stem cells.World journal of stem cells · 2021
    Review
  9. Annual review of cancer biology · 2021
    Article
  10. Frontiers in aging · 2021
    Review
  11. Article
  12. Review
  13. Bmi1 Maintains the Self-Renewal Property of Innate-like B Lymphocytes.Journal of immunology (Baltimore, Md. : 1950) · 2020
    Article
  14. Review
  15. Review
  16. Article
  17. Review
  18. Review
  19. Review
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

14 authors at 4 institutions in 2 countries.

Sonia CellotInstitute for Research in Immunology and Cancer, Université de Montréal, Montréal, QC, Canada.
Kristin J Hope
Jalila Chagraoui
Martin Sauvageau
Éric Deneault
Tara MacRae
Nadine Mayotte
Brian T Wilhelm
Josette R Landry
Stephen B Ting
Jana Krosl
Keith Humphries
Alexander Thompson
Guy Sauvageau
Institute for Research in Immunology and Cancer · CABC Cancer Agency · CAMonash University · AUUniversité de Montréal · CA

Funding

CIHR 76348-1
6 · The paper itself

Abstract

Histone methylation is a dynamic and reversible process proposed to directly impact on stem cell fate. The Jumonji (JmjC) domain-containing family of demethylases comprises 27 members that target mono-, di-, and trimethylated lysine residues of histone (or nonhistone) proteins. To evaluate their role in regulation of hematopoietic stem cell (HSC) behavior, we performed an in vivo RNAi-based functional screen and demonstrated that Jarid1b and Jhdm1f play opposing roles in regulation of HSC activity. Decrease in Jarid1b levels correlated with an in vitro expansion of HSCs with preserved long-term in vivo lymphomyeloid differentiation potential. Through RNA sequencing analysis, Jarid1b knockdown was associated with increased expression levels of several HSC regulators (Hoxa7, Hoxa9, Hoxa10, Hes1, Gata2) and reduced levels of differentiation-associated genes. shRNA against Jhdmlf, in contrast, impaired hematopoietic reconstitution of bone marrow cells. Together, our studies identified Jarid1b as a negative regulator of HSC activity and Jhdmlf as a positive regulator of HSC activity.

Indexed as

AnimalsCells, CulturedDNA-Binding ProteinsGene Expression RegulationGene Knockdown TechniquesHematopoiesisHematopoietic Stem CellsHigh-Throughput Screening AssaysHistone DemethylasesJumonji Domain-Containing Histone DemethylasesMiceMice, CongenicMice, Inbred C57BLRNA InterferenceRNA, Small InterferingTranscription FactorsDNA-Binding ProteinsHistone DemethylasesJumonji Domain-Containing Histone DemethylasesKdm5b protein, mousePHF8 protein, mouseRNA, Small InterferingTranscription Factors

Identifiers

PMID23777767
PMCPMC5289888
OpenAlexW2062323121

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.