Evidence map›Paper›PMID 23777212›Full record

ArticleExpert review of proteomics2013

Proximity probing assays for simultaneous visualization of protein complexes in situ.

José Manuel Afonso Moreira, Stine Buch Thorsen, Nils Brünner, Jan Stenvang

Abstract readComment
PubMed Publisher
In one paragraph

Article in Expert review of proteomics, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.3field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 3 citations in OpenAlex.

  1. Article
  2. Proximity assays for sensitive quantification of proteins.Biomolecular detection and quantification · 2015
    Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 2 countries.

José Manuel Afonso MoreiraSino-Danish Breast Cancer Research Centre and Danish Centre for Translational Breast Cancer Research, Section of Molecular Disease Biology, Department of Veterinary Disease Biology, Faculty of Health and Medical Sciences, University of Copenhagen, Dyrlægevej 88, 1870 Frederiksberg C, Denmark.
Stine Buch Thorsen
Nils Brünner
Jan Stenvang
University of Copenhagen · DKBreast Cancer Research Foundation · USDanish Breast Cancer Cooperative Group · DK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

evaluation ofLeuchowius KJ, Clausson CM, Grannas K et al. Parallel visualization of multiple protein complexes in individual cells in tumor tissue. Mol. Cell Proteomics doi:10.1074/mcp.O112.023374 (2013) (Epub ahead of print). Techniques for in situ detection and quantification of proteins in fixed tissue remain an important element of both basic biological analyses and clinical biomarker research. The practical importance of such techniques can be exemplified by the everyday clinical use of immunohistochemical detection of the estrogen receptor and HER2 in tissues from breast cancer patients. Several techniques are currently available for detection of single proteins and post-translational modifications, but very few are suitable for detection of protein complexes. Methods that enable simultaneous detection and quantification of protein complexes provide novel possibilities for understanding the biological role(s) of protein complexes and may open new opportunities to improve clinical biomarker research. Leuchowius et al. describe an improved proximity ligation assay for in situ detection of protein complexes, which is able to detect and quantify several protein complexes simultaneously in the same tissue specimen.

Indexed as

Gene Expression Regulation, NeoplasticAnimalsBreast NeoplasmsErb-b2 Receptor Tyrosine KinasesErbB ReceptorsFemaleHumansMolecular ImagingReceptor, ErbB-3Erb-b2 Receptor Tyrosine KinasesErbB ReceptorsReceptor, ErbB-3

Identifiers

PMID23777212
OpenAlexW2093313554

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.