Evidence map›Paper›PMID 23776525›Full record

ArticlePloS one2013

Susceptibility to DNA damage as a molecular mechanism for non-syndromic cleft lip and palate.

Gerson Shigeru Kobayashi, Lucas Alvizi, Daniele Yumi Sunaga, Philippa Francis-West, Anna Kuta, Bruno Vinícius Pimenta Almada, Simone Gomes Ferreira, Leonardo Carmo de Andrade-Lima, Daniela Franco Bueno, Cássio Eduardo Raposo-Amaral and 2 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
3.5field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 56 citations in OpenAlex.

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  17. Dental genetics in Brazil: Where we are.Molecular genetics & genomic medicine · 2018
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 2 countries.

Gerson Shigeru KobayashiHuman Genome Research Center, Institute for Biosciences, University of São Paulo, São Paulo, Brazil.
Lucas Alvizi
Daniele Yumi Sunaga
Philippa Francis-West
Anna Kuta
Bruno Vinícius Pimenta Almada
Simone Gomes Ferreira
Leonardo Carmo de Andrade-Lima
Daniela Franco Bueno
Cássio Eduardo Raposo-Amaral
Carlos Frederico Menck
Maria Rita Passos-Bueno
Universidade de São Paulo · BRKing's College London · GBHospital of Sobrapar · BR

Funding

Biotechnology and Biological Sciences Research Council BB/G021074/1
6 · The paper itself

Abstract

Non-syndromic cleft lip/palate (NSCL/P) is a complex, frequent congenital malformation, determined by the interplay between genetic and environmental factors during embryonic development. Previous findings have appointed an aetiological overlap between NSCL/P and cancer, and alterations in similar biological pathways may underpin both conditions. Here, using a combination of transcriptomic profiling and functional approaches, we report that NSCL/P dental pulp stem cells exhibit dysregulation of a co-expressed gene network mainly associated with DNA double-strand break repair and cell cycle control (p = 2.88×10(-2)-5.02×10(-9)). This network included important genes for these cellular processes, such as BRCA1, RAD51, and MSH2, which are predicted to be regulated by transcription factor E2F1. Functional assays support these findings, revealing that NSCL/P cells accumulate DNA double-strand breaks upon exposure to H2O2. Furthermore, we show that E2f1, Brca1 and Rad51 are co-expressed in the developing embryonic orofacial primordia, and may act as a molecular hub playing a role in lip and palate morphogenesis. In conclusion, we show for the first time that cellular defences against DNA damage may take part in determining the susceptibility to NSCL/P. These results are in accordance with the hypothesis of aetiological overlap between this malformation and cancer, and suggest a new pathogenic mechanism for the disease.

Indexed as

DNA Breaks, Double-StrandedBRCA1 ProteinCell CycleCells, CulturedChildCleft LipCleft PalateDental PulpDNA PrimersDNA RepairE2F1 Transcription FactorFlow CytometryGene Expression ProfilingGene Regulatory NetworksHumansIn Situ HybridizationBRCA1 ProteinBRCA1 protein, humanDNA PrimersE2F1 protein, humanE2F1 Transcription FactorMSH2 protein, humanMutS Homolog 2 ProteinRAD51 protein, humanRad51 Recombinase

Identifiers

PMID23776525
PMCPMC3680497
OpenAlexW2004034102

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.