Evidence map›Paper›PMID 23776515›Full record

ArticlePloS one2013

Diversity of plant methionine sulfoxide reductases B and evolution of a form specific for free methionine sulfoxide.

Dung Tien Le, Lionel Tarrago, Yasuko Watanabe, Alaattin Kaya, Byung Cheon Lee, Uyen Tran, Rie Nishiyama, Dmitri E Fomenko, Vadim N Gladyshev, Lam-Son Phan Tran

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.6field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 29 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Methionine Sulfoxide Reductases of Archaea.Antioxidants (Basel, Switzerland) · 2018
    Review
  5. Review
  6. Drought-Responsive Mechanisms in Plant Leaves Revealed by Proteomics.International journal of molecular sciences · 2016
    Review
  7. Review
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 3 countries.

Dung Tien LeSignaling Pathway Research Unit, RIKEN Center for Sustainable Resource Science, Yokohama, Japan. tiendung.le@riken.jp
Lionel Tarrago
Yasuko Watanabe
Alaattin Kaya
Byung Cheon Lee
Uyen Tran
Rie Nishiyama
Dmitri E Fomenko
Vadim N Gladyshev
Lam-Son Phan Tran
RIKEN Center for Sustainable Resource Science · JPHarvard University · USBrigham and Women's Hospital · USUniversity of Nebraska–Lincoln · US

Funding

Methionine sulfoxide reduction, selenium and agingR01AG021518 · NIA · UNIVERSITY OF NEBRASKA LINCOLN · PI GLADYSHEV, VADIM N. · 2003 to 2018
$5.0M
NIA NIH HHS AG021518NIA NIH HHS R01 AG021518
6 · The paper itself

Abstract

Methionine can be reversibly oxidized to methionine sulfoxide (MetO) under physiological conditions. Organisms evolved two distinct methionine sulfoxide reductase families (MSRA & MSRB) to repair oxidized methionine residues. We found that 5 MSRB genes exist in the soybean genome, including GmMSRB1 and two segmentally duplicated gene pairs (GmMSRB2 and GmMSRB5, GmMSRB3 and GmMSRB4). GmMSRB2 and GmMSRB4 proteins showed MSRB activity toward protein-based MetO with either DTT or thioredoxin (TRX) as reductants, whereas GmMSRB1 was active only with DTT. GmMSRB2 had a typical MSRB mechanism with Cys121 and Cys 68 as catalytic and resolving residues, respectively. Surprisingly, this enzyme also possessed the MSRB activity toward free Met-R-O with kinetic parameters similar to those reported for fRMSR from Escherichia coli, an enzyme specific for free Met-R-O. Overexpression of GmMSRB2 or GmMSRB4 in the yeast cytosol supported the growth of the triple MSRA/MSRB/fRMSR (Δ3MSRs) mutant on MetO and protected cells against H2O2-induced stress. Taken together, our data reveal an unexpected diversity of MSRBs in plants and indicate that, in contrast to mammals that cannot reduce free Met-R-O and microorganisms that use fRMSR for this purpose, plants evolved MSRBs for the reduction of both free and protein-based MetO.

Indexed as

Evolution, MolecularGenetic VariationBase SequenceComputational BiologyEscherichia coliGenes, PlantGlycine maxMethionineMethionine Sulfoxide ReductasesMolecular Sequence DataMutagenesis, Site-DirectedPlantsPolymerase Chain ReactionSequence Analysis, DNAStress, PhysiologicalSyntenyMethioninemethionine sulfoxidemethionine sulfoxide reductaseMethionine Sulfoxide Reductases

Identifiers

PMID23776515
PMCPMC3680461
OpenAlexW2129110865

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.