Evidence map›Paper›PMID 23774216›Full record

ArticleCancer research2013

LIN28 Expression in malignant germ cell tumors downregulates let-7 and increases oncogene levels.

Matthew J Murray, Harpreet K Saini, Charlotte A Siegler, Jennifer E Hanning, Emily M Barker, Stijn van Dongen, Dawn M Ward, Katie L Raby, Ian J Groves, Cinzia G Scarpini and 6 more

Open access · greenAbstract read
In one paragraph

Article in Cancer research, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 82 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Review
  6. Article
  7. Article
  8. Epigenetic Regulation of Driver Genes in Testicular Tumorigenesis.International journal of molecular sciences · 2023
    Review
  9. Archives animal breeding · 2023
    Article
  10. Review
  11. Non-Epithelial Ovarian Cancers: How Much Do We Really Know?International journal of environmental research and public health · 2022
    Review
  12. Review
  13. CircPVT1 promotes proliferation of lung squamous cell carcinoma by binding to miR-30d/e.Journal of experimental & clinical cancer research : CR · 2021
    Article
  14. To Be or Not to Be a Germ Cell: The Extragonadal Germ Cell Tumor Paradigm.International journal of molecular sciences · 2021
    Review
  15. Article
  16. Review
  17. Review
  18. Review
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 4 institutions in 1 country.

Matthew J MurrayDepartment of Pathology, Cambridge University, Cambridge, United Kingdom. mjm16@cam.ac.uk
Harpreet K Saini
Charlotte A Siegler
Jennifer E Hanning
Emily M Barker
Stijn van Dongen
Dawn M Ward
Katie L Raby
Ian J Groves
Cinzia G Scarpini
Mark R Pett
Claire M Thornton
Anton J Enright
James C Nicholson
Nicholas Coleman
CCLG
European Bioinformatics Institute · GBUniversity of Ulster · GBAddenbrooke's Hospital · GBRoyal Victoria Hospital · GB

Funding

Cancer Research UK 13080Cancer Research UK A13080Medical Research Council MC_U105359875
6 · The paper itself

Abstract

Despite their clinicopathologic heterogeneity, malignant germ cell tumors (GCT) share molecular abnormalities that are likely to be functionally important. In this study, we investigated the potential significance of downregulation of the let-7 family of tumor suppressor microRNAs in malignant GCTs. Microarray results from pediatric and adult samples (n = 45) showed that LIN28, the negative regulator of let-7 biogenesis, was abundant in malignant GCTs, regardless of patient age, tumor site, or histologic subtype. Indeed, a strong negative correlation existed between LIN28 and let-7 levels in specimens with matched datasets. Low let-7 levels were biologically significant, as the sequence complementary to the 2 to 7 nt common let-7 seed "GAGGUA" was enriched in the 3' untranslated regions of mRNAs upregulated in pediatric and adult malignant GCTs, compared with normal gonads (a mixture of germ cells and somatic cells). We identified 27 mRNA targets of let-7 that were upregulated in malignant GCT cells, confirming significant negative correlations with let-7 levels. Among 16 mRNAs examined in a largely independent set of specimens by quantitative reverse transcription PCR, we defined negative-associations with let-7e levels for six oncogenes, including MYCN, AURKB, CCNF, RRM2, MKI67, and C12orf5 (when including normal control tissues). Importantly, LIN28 depletion in malignant GCT cells restored let-7 levels and repressed all of these oncogenic let-7 mRNA targets, with LIN28 levels correlating with cell proliferation and MYCN levels. Conversely, ectopic expression of let-7e was sufficient to reduce proliferation and downregulate MYCN, AURKB, and LIN28, the latter via a double-negative feedback loop. We conclude that the LIN28/let-7 pathway has a critical pathobiologic role in malignant GCTs and therefore offers a promising target for therapeutic intervention.

Indexed as

AdultBlotting, WesternChildFemaleGene Expression Regulation, NeoplasticHumansMaleMicroRNAsNeoplasms, Germ Cell and EmbryonalOligonucleotide Array Sequence AnalysisOncogenesReverse Transcriptase Polymerase Chain ReactionRNA-Binding ProteinsTransfectionLin28A protein, humanMicroRNAsmirnlet7 microRNA, humanRNA-Binding Proteins

Identifiers

PMID23774216
PMCPMC3732484
OpenAlexW2154181141

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.