Evidence map›Paper›PMID 23773687›Full record

ArticleBMC microbiology2013

Polymyxin P is the active principle in suppressing phytopathogenic Erwinia spp. by the biocontrol rhizobacterium Paenibacillus polymyxa M-1.

Ben Niu, Joachim Vater, Christian Rueckert, Jochen Blom, Maik Lehmann, Jin-Jiang Ru, Xiao-Hua Chen, Qi Wang, Rainer Borriss

Abstract read
In one paragraph

Article in BMC microbiology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Genomic and phenotypic analyses revealFrontiers in microbiology · 2024
    Article
  10. Polymyxins: recent advances and challenges.Frontiers in pharmacology · 2024
    Review
  11. Article
  12. Isolation, Characterization and Whole-Genome Analysis ofJournal of microbiology and biotechnology · 2023
    Article
  13. Review
  14. Biocontrol of Soft RotMicroorganisms · 2023
    Article
  15. Review
  16. Antibacterial Activity of a Novel Oligosaccharide fromMolecules (Basel, Switzerland) · 2022
    Article
  17. Article
  18. GeneFrontiers in microbiology · 2022
    Article
  19. Polymyxin BFrontiers in cellular and infection microbiology · 2022
    Article
  20. Active Metabolites From the EndophyteFrontiers in chemistry · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Ben Niu
Joachim Vater
Christian Rueckert
Jochen Blom
Maik Lehmann
Jin-Jiang Ru
Xiao-Hua Chen
Qi Wang
Rainer Borriss

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundNine gene clusters dedicated to nonribosomal synthesis of secondary metabolites with possible antimicrobial action, including polymyxin and fusaricidin, were detected within the whole genome sequence of the plant growth-promoting rhizobacterium (PGPR) Paenibacillus polymyxa M-1. To survey the antimicrobial compounds expressed by M-1 we analyzed the active principle suppressing phytopathogenic Erwinia spp.

resultsP. polymyxa M-1 suppressed the growth of phytopathogenic Erwinia amylovora Ea 273, and E. carotovora, the causative agents of fire blight and soft rot, respectively. By MALDI-TOF mass spectrometry and reversed-phase high-performance liquid chromatography (RP-HPLC), two antibacterial compounds bearing molecular masses of 1190.9 Da and 1176.9 Da were detected as being the two components of polymyxin P, polymyxin P1 and P2, respectively. The active principle acting against the two Erwinia strains was isolated from TLC plates and identified by postsource decay (PSD)-MALDI-TOF mass spectrometry as polymyxin P1 and polymyxin P2. These findings were corroborated by domain structure analysis of the polymyxin (pmx) gene cluster detected in the M-1 chromosome which revealed that corresponding to the chemical structure of polymyxin P, the gene cluster is encoding D-Phe in position 6 and L-Thr in position 7.

conclusionsIdentical morphological changes in the cell wall of the bacterial phytopathogens treated with either crude polymyxin P or culture supernatant of M-1 corroborated that polymyxin P is the main component of the biocontrol effect exerted by strain M-1 against phytopathogenic Erwinia spp.

Indexed as

Anti-Bacterial AgentsBiological Control AgentsCell WallErwiniaMultigene FamilyPaenibacillusPolymyxinsAnti-Bacterial AgentsBiological Control AgentsPolymyxins

Identifiers

PMID23773687
PMCPMC3708778

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.