Evidence map›Paper›PMID 23773363›Full record

ArticleBMC genomics2013

Cubilin expression is monoallelic and epigenetically augmented via PPARs.

Obaidullah Aseem, Jeremy L Barth, Sandra C Klatt, Brian T Smith, W Scott Argraves

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 25 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. The Benefits of Tubular Proteinuria: An Evolutionary Perspective.Journal of the American Society of Nephrology : JASN · 2018
    Article
  8. Article
  9. Article
  10. Article
  11. Proximal Tubules Have the Capacity to Regulate Uptake of Albumin.Journal of the American Society of Nephrology : JASN · 2016
    Article
  12. Review
  13. Cubilin maintains blood levels of HDL and albumin.Journal of the American Society of Nephrology : JASN · 2014
    Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Obaidullah AseemDepartment of Regenerative Medicine and Cell Biology, Medical University of South Carolina, Charleston, SC 29425, USA.
Jeremy L Barth
Sandra C Klatt
Brian T Smith
W Scott Argraves
Medical University of South Carolina · US

Funding

Mechanisms & Significance of Cublin-Mediated HDL UptakeR01HL061873 · NHLBI · MEDICAL UNIVERSITY OF SOUTH CAROLINA · PI ARGRAVES, WILLIAM SCOTT · 2000 to 2009
$2.6M
NHLBI NIH HHS HL061873
6 · The paper itself

Abstract

backgroundCubilin is an endocytic receptor that is necessary for renal and intestinal absorption of a range of ligands. Endocytosis mediated by cubilin and its co-receptor megalin is the principal mechanism for proximal tubule reabsorption of proteins from the glomerular filtrate. Cubilin is also required for intestinal endocytosis of intrinsic factor-vitamin B12 complex. Despite its importance, little is known about the regulation of cubilin expression.

resultsHere we show that cubilin expression is under epigenetic regulation by at least two processes. The first process involves inactivation of expression of one of the cubilin alleles. This monoallelic expression state could not be transformed to biallelic by inhibiting DNA methylation or histone deacetylation. The second process involves transcriptional regulation of cubilin by peroxisome proliferator-activated receptor (PPAR) transcription factors that are themselves regulated by DNA methylation and histone deacetylation. This is supported by findings that inhibitors of DNA methylation and histone deacetylation, 5Aza and TSA, increase cubilin mRNA and protein in renal and intestinal cell lines. Not only was the expression of PPARα and γ inducible by 5Aza and TSA, but the positive effects of TSA and 5Aza on cubilin expression were also dependent on both increased PPAR transcription and activation. Additionally, 5Aza and TSA had similar effects on the expression of the cubilin co-receptor, megalin.

conclusionsTogether, these findings reveal that cubilin and megalin mRNA expression is under epigenetic control and thus point to new avenues for overcoming pathological suppression of these genes through targeting of epigenetic regulatory processes.

Indexed as

AllelesEpigenesis, GeneticGene Expression RegulationAlbuminsAnimalsAzacitidineBase SequenceCaco-2 CellsExonsHumansHydroxamic AcidsIntestinesKidney Tubules, ProximalLow Density Lipoprotein Receptor-Related Protein-2MaleMembrane ProteinsAlbuminsAmn protein, mouseAzacitidineHydroxamic Acidsintrinsic factor-cobalamin receptorLow Density Lipoprotein Receptor-Related Protein-2Membrane ProteinsPeroxisome Proliferator-Activated ReceptorsReceptors, Cell Surfacetrichostatin A

Identifiers

PMID23773363
PMCPMC3706236
OpenAlexW1993009582

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.