Evidence map›Paper›PMID 23772023›Full record

ArticleJournal of immunology (Baltimore, Md. : 1950)2013

Opposing roles of STAT4 and Dnmt3a in Th1 gene regulation.

Duy Pham, Qing Yu, Crystal C Walline, Rajarajeswari Muthukrishnan, Janice S Blum, Mark H Kaplan

Open access · bronzeAbstract read
In one paragraph

Article in Journal of immunology (Baltimore, Md. : 1950), 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 54 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Review
  6. Review
  7. Article
  8. Review
  9. Article
  10. JMJD family proteins in cancer and inflammation.Signal transduction and targeted therapy · 2022
    Review
  11. Article
  12. Review
  13. Histone 3 Lysine 27 Trimethylation Signature in Breast Cancer.International journal of molecular sciences · 2021
    Review
  14. Review
  15. Review
  16. Jumonji domain containing-3 (JMJD3) inhibition attenuates IL-1β-induced chondrocytes damage in vitro and protects osteoarthritis cartilage in vivo.Inflammation research : official journal of the European Histamine Research Society ... [et al.] · 2020
    Article
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Duy PhamDepartment of Pediatrics, Herman B Wells Center for Pediatric Research, Indiana University School of Medicine, Indianapolis, IN 46202, USA.
Qing Yu
Crystal C Walline
Rajarajeswari Muthukrishnan
Janice S Blum
Mark H Kaplan
Indiana University School of MedicineIndiana University – Purdue University Indianapolis · US

Funding

BASIC SCIENCE STUDIES ON GENE THERAPY OF BLOOD DISEASEST32HL007910 · NHLBI · INDIANA UNIV-PURDUE UNIV AT INDIANAPOLIS · PI Roland W. Herzog, Reuben Kapur · 1999 to 2026
$7.6M
IU Training Program in Molecular Physiology and Clinical Mechanisms of Lung DiseaseT32HL091816 · NHLBI · INDIANA UNIVERSITY INDIANAPOLIS · PI Erick Forno, Roberto F. Machado · 2009 to 2026
$4.3M
STAT4 IMMUNOLOGYR01AI045515 · NIAID · INDIANA UNIV-PURDUE UNIV AT INDIANAPOLIS · PI KAPLAN, MARK H · 1999 to 2014
$4.3M
CLASS II ANTIGEN PRESENTATION VIA CHAPERONE MEDIATED AUTOPHAGYR01AI079065 · NIAID · INDIANA UNIVERSITY INDIANAPOLIS · PI BLUM, JANICE S · 2010 to 2014
$1.8M
Cancer Biology Training ProgramT32CA111198 · NCI · INDIANA UNIV-PURDUE UNIV AT INDIANAPOLIS · PI NAKSHATRI, HARIKRISHNA · 2005 to 2009
$1.8M
Stat4 ImmunobiologyR56AI045515 · NIAID · INDIANA UNIVERSITY INDIANAPOLIS · PI KAPLAN, MARK H · 2009 to 2009
$385k
NCI NIH HHS T32 CA111198NHLBI NIH HHS T32 HL007910NHLBI NIH HHS T32 HL091816NIAID NIH HHS R01 AI045515NIAID NIH HHS R01 AI079065NIAID NIH HHS R56 AI045515
6 · The paper itself

Abstract

The STAT transcription factor STAT4 is a critical regulator of Th1 differentiation and inflammatory disease. Yet, how STAT4 regulates gene expression is still unclear. In this report, we define a STAT4-dependent sequence of events including histone H3 lysine 4 methylation, Jmjd3 association with STAT4 target loci, and a Jmjd3-dependent decrease in histone H3 lysine 27 trimethylation and DNA methyltransferase (Dnmt) 3a association with STAT4 target loci. Dnmt3a has an obligate role in repressing Th1 gene expression, and in Th1 cultures deficient in both STAT4 and Dnmt3a, there is recovery in the expression of a subset of Th1 genes that is sufficient to increase IFN-γ production. Moreover, although STAT4-deficient mice are protected from the development of experimental autoimmune encephalomyelitis, mice deficient in STAT4 and conditionally deficient in Dnmt3a in T cells develop paralysis. Th1 genes that are derepressed in the absence of Dnmt3a have greater induction after the ectopic expression of the Th1-associated transcription factors T-bet and Hlx1. Together, these data demonstrate that STAT4 and Dnmt3a play opposing roles in regulating Th1 gene expression, and that one mechanism for STAT4-dependent gene programming is in establishing a derepressed genetic state susceptible to transactivation by additional fate-determining transcription factors.

Indexed as

AnimalsChromatinCore Binding Factor Alpha 3 SubunitDNA (Cytosine-5-)-MethyltransferasesDNA Methyltransferase 3AEncephalomyelitis, Autoimmune, ExperimentalGene Expression RegulationHistonesHomeodomain ProteinsInterferon-gammaInterferon gamma ReceptorInterleukin-12Jumonji Domain-Containing Histone DemethylasesMethylationMiceMice, Inbred C57BLChromatinCore Binding Factor Alpha 3 SubunitDNA (Cytosine-5-)-MethyltransferasesDNA Methyltransferase 3ADnmt3a protein, mouseHistonesHlx protein, mouseHomeodomain ProteinsInterferon-gammaInterferon gamma ReceptorInterleukin-12Jumonji Domain-Containing Histone DemethylasesKdm6b protein, mouseReceptors, InterferonRNA, Small InterferingRunx3 protein, mouseStat4 protein, mouseSTAT4 Transcription FactorT-bet Transcription FactorT-Box Domain ProteinsTranscription Factors

Identifiers

PMID23772023
PMCPMC3703830
OpenAlexW2137382973

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.