Evidence map›Paper›PMID 23770855›Full record

ArticleOncogene2014

Gene amplification of the histone methyltransferase SETDB1 contributes to human lung tumorigenesis.

M Rodriguez-Paredes, A Martinez de Paz, L Simó-Riudalbas, S Sayols, C Moutinho, S Moran, A Villanueva, M Vázquez-Cedeira, P A Lazo, F Carneiro and 4 more

Open access · hybridAbstract read
In one paragraph

Article in Oncogene, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 79 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
79citing papers in PubMed, 2 pooled it
8.2field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

79 citing papers in PubMed, 2 syntheses or guidelines pooled it, 165 citations in OpenAlex.

  1. Pooled it
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  14. Article
  15. SETDB1 regulates microtubule dynamics.Cell proliferation · 2022
    Article
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  18. Article
  19. Review
  20. ProxyBind: A compendium of binding sites for proximity-induced pharmacology.Computational and structural biotechnology journal · 2022
    Article

19 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 6 institutions in 2 countries.

M Rodriguez-ParedesCancer Epigenetics and Biology Progrm (PEBC), Bellvitge Biomedical Research Institute (IDIBELL), Barcelona, Spain.
A Martinez de PazCancer Epigenetics and Biology Progrm (PEBC), Bellvitge Biomedical Research Institute (IDIBELL), Barcelona, Spain.
L Simó-RiudalbasCancer Epigenetics and Biology Progrm (PEBC), Bellvitge Biomedical Research Institute (IDIBELL), Barcelona, Spain.
S SayolsCancer Epigenetics and Biology Progrm (PEBC), Bellvitge Biomedical Research Institute (IDIBELL), Barcelona, Spain.
C MoutinhoCancer Epigenetics and Biology Progrm (PEBC), Bellvitge Biomedical Research Institute (IDIBELL), Barcelona, Spain.
S MoranCancer Epigenetics and Biology Progrm (PEBC), Bellvitge Biomedical Research Institute (IDIBELL), Barcelona, Spain.
A VillanuevaTranslational Research Laboratory, IDIBELL-Institut Catala d'Oncologia, Barcelona, Spain.
M Vázquez-Cedeira1] Experimental Therapeutics and Translational Oncology Program, Instituto de Biología Molecular y Celular del Cáncer, CSIC-Universidad de Salamanca, Salamanca, Spain [2] Instituto de Investigación Biomédica de Salamanca (IBSAL), Salamanca, Spain.
P A Lazo1] Experimental Therapeutics and Translational Oncology Program, Instituto de Biología Molecular y Celular del Cáncer, CSIC-Universidad de Salamanca, Salamanca, Spain [2] Instituto de Investigación Biomédica de Salamanca (IBSAL), Salamanca, Spain.
F CarneiroDepartment of Pathology, Centro Hospitalar São João/Medical Faculty and Institute of Molecular Pathology and Immunology of the University of Porto (IPATIMUP), Porto, Portugal.
C S MouraDepartment of Pathology, Centro Hospitalar São João/Medical Faculty and Institute of Molecular Pathology and Immunology of the University of Porto (IPATIMUP), Porto, Portugal.
J VieiraDepartment of Genetics, Portuguese Oncology Institute and Biomedical Sciences Institute (ICBAS), University of Porto, Porto, Portugal.
M R TeixeiraDepartment of Genetics, Portuguese Oncology Institute and Biomedical Sciences Institute (ICBAS), University of Porto, Porto, Portugal.
M Esteller1] Cancer Epigenetics and Biology Progrm (PEBC), Bellvitge Biomedical Research Institute (IDIBELL), Barcelona, Spain [2] Department of Physiological Sciences II, School of Medicine, University of Barcelona, Barcelona, Spain [3] Institucio Catalana de Recerca i Estudis Avançats (ICREA), Barcelona, Spain.
Institut d'Investigació Biomédica de Bellvitge · ESInstituto Português de Oncologia Francisco Gentil · PTUniversidad de Salamanca · ESHospital de São João · PTUniversidade do Porto · PTUniversitat de Barcelona · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Disruption of the histone modification patterns is one of the most common features of human tumors. However, few genetic alterations in the histone modifier genes have been described in tumorigenesis. Herein we show that the histone methyltransferase SETDB1 undergoes gene amplification in non-small and small lung cancer cell lines and primary tumors. The existence of additional copies of the SETDB1 gene in these transformed cells is associated with higher levels of the corresponding mRNA and protein. From a functional standpoint, the depletion of SETDB1 expression in amplified cells reduces cancer growth in cell culture and nude mice models, whereas its overexpression increases the tumor invasiveness. The increased gene dosage of SETDB1 is also associated with enhanced sensitivity to the growth inhibitory effect mediated by the SETDB1-interfering drug mithramycin. Overall, the findings identify SETDB1 as a bona fide oncogene undergoing gene amplification-associated activation in lung cancer and suggest its potential for new therapeutic strategies.

Indexed as

Gene AmplificationAdenocarcinomaAnimalsCarcinogenesisCarcinoma, Squamous CellCell Line, TumorGene DosageHistone-Lysine N-MethyltransferaseHumansLung NeoplasmsMiceMice, NudeNeoplasm InvasivenessNeoplasm TransplantationProtein MethyltransferasesHistone-Lysine N-MethyltransferaseProtein MethyltransferasesSETDB1 protein, human

Identifiers

PMID23770855
PMCPMC4031636
OpenAlexW2164166000

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.