Evidence map›Paper›PMID 23770708›Full record

ArticleNature chemical biology2013

Antituberculosis thiophenes define a requirement for Pks13 in mycolic acid biosynthesis.

Regina Wilson, Pradeep Kumar, Vijay Parashar, Catherine Vilchèze, Romain Veyron-Churlet, Joel S Freundlich, S Whitney Barnes, John R Walker, Michael J Szymonifka, Emily Marchiano and 6 more

Open access · greenAbstract read
In one paragraph

Article in Nature chemical biology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 76 papers.

0numbers the graph read from it
0cells of the map it votes in
76citing papers in PubMed
4.9field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

76 citing papers in PubMed, 159 citations in OpenAlex.

  1. Article
  2. Review
  3. Exquisite specificity of Pks13 defines the essentiality of trehalose in mycobacteria.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Genetic and Cheminformatic Characterization ofACS infectious diseases · 2025
    Article
  9. Article
  10. Article
  11. Article
  12. Inhibitors of the Thioesterase Activity ofACS infectious diseases · 2024
    Article
  13. Unlocking Opportunities forACS infectious diseases · 2024
    Review
  14. Review
  15. Article
  16. Article
  17. Article
  18. Structural basis for the development of potential inhibitors targeting FadD23 from Mycobacterium tuberculosis.Acta crystallographica. Section F, Structural biology communications · 2023
    Article
  19. Article
  20. Article

16 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

16 authors at 6 institutions in 2 countries.

Regina WilsonDivision of Infectious Disease, New Jersey Medical School, University of Medicine and Dentistry of New Jersey, Newark, New Jersey, USA.
Pradeep Kumar
Vijay Parashar
Catherine Vilchèze
Romain Veyron-Churlet
Joel S Freundlich
S Whitney Barnes
John R Walker
Michael J Szymonifka
Emily Marchiano
Shubhada Shenai
Roberto Colangeli
William R Jacobs
Matthew B Neiditch
Laurent Kremer
David Alland
Rutgers New Jersey Medical SchoolRutgers, The State University of New Jersey · USGenomics Institute of the Novartis Research Foundation · USUniversité de Montpellier · FRAlbert Einstein College of Medicine · USHoward Hughes Medical Institute · US

Funding

Immunology/Pathology CoreP30AI051519 · NIAID · YESHIVA UNIVERSITY · PI BERMAN, JOAN WEINBERGER · 2003 to 2013
$18.6M
Rutgers Mass Spectrometry Core for Integrative Neuroscience ResearchP30NS046593 · NINDS · UNIV OF MED/DENT OF NJ-NJ MEDICAL SCHOOL · PI LI, HONG, LOBEL, PETER · 2004 to 2018
$9.9M
Molecular Genetic Analysis of Mycobacterium TuberculosisR37AI026170 · NIAID · ALBERT EINSTEIN COL OF MED YESHIVA UNIV · PI WILLIAM Robert JACOBS · 2004 to 2026
$7.7M
MOLECULAR GENETIC ANALYSIS OF MYCOBACTERIUM TUBERCULOSISR01AI026170 · NIAID · YESHIVA UNIVERSITY · PI JACOBS, WILLIAM ROBERT · 1989 to 2022
$7.1M
Rapid Diagnosis of XDR TuberculosisR01AI080653 · NIAID · UNIV OF MED/DENT OF NJ-NJ MEDICAL SCHOOL · PI ALLAND, DAVID · 2009 to 2013
$2.8M
Structural Biology of Multifunctional Bacterial PhosphatasesR01AI081736 · NIAID · UNIV OF MED/DENT OF NJ-NJ MEDICAL SCHOOL · PI NEIDITCH, MATTHEW B · 2009 to 2012
$1.5M
TB DRUG SCREENING:TB ANTIMICROBIAL ACQ &COORD. FACILITYN01AI095364 · NIAID · SOUTHERN RESEARCH INSTITUTE · PI SECRIST, JOHN A · 1999 to 2000
$778k
MOLECULAR GENETIC ANALYSIS OF MYCOBACTERIUM TUBERCULOSISR22AI026170 · NIAID · YESHIVA UNIVERSITY · PI JACOBS, WILLIAM ROBERT · 1989 to 1991
–
NIAID NIH HHS AI-051519NIAID NIH HHS AI-15449NIAID NIH HHS AI26170NIAID NIH HHS N01 AI015449NIAID NIH HHS N01 AI095364NIAID NIH HHS P30 AI051519NIAID NIH HHS R01 AI026170NIAID NIH HHS R01 AI080653NIAID NIH HHS R01 AI081736NIAID NIH HHS R37 AI026170NINDS NIH HHS NS046593Wellcome Trust 095515
6 · The paper itself

Abstract

We report a new class of thiophene (TP) compounds that kill Mycobacterium tuberculosis by the previously uncharacterized mechanism of Pks13 inhibition. An F79S mutation near the catalytic Ser55 site in Pks13 conferred TP resistance in M. tuberculosis. Overexpression of wild-type Pks13 resulted in TP resistance, and overexpression of the Pks13(F79S) mutant conferred high resistance. In vitro, TP inhibited fatty acyl-AMP loading onto Pks13. TP inhibited mycolic acid biosynthesis in wild-type M. tuberculosis, but it did so to a much lesser extent in TP-resistant M. tuberculosis. TP treatment was bactericidal and equivalent to treatment with the first-line drug isoniazid, but it was less likely to permit emergent resistance. Combined isoniazid and TP treatment resulted in sterilizing activity. Computational docking identified a possible TP-binding groove within the Pks13 acyl carrier protein domain. This study confirms that M. tuberculosis Pks13 is required for mycolic acid biosynthesis, validates it as a druggable target and demonstrates the therapeutic potential of simultaneously inhibiting multiple targets in the same biosynthetic pathway.

Indexed as

Antitubercular AgentsBacterial ProteinsBiocatalysisMicrobial Sensitivity TestsMolecular StructureMutationMycobacterium tuberculosisMycolic AcidsPolyketide SynthasesStructure-Activity RelationshipThiophenesAntitubercular AgentsBacterial ProteinsMycolic Acidspolyketide synthase Pks13, Mycobacterium tuberculosisPolyketide SynthasesThiophenes

Identifiers

PMID23770708
PMCPMC3720791
OpenAlexW2138397902

What OpenQuestion holds

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LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.