Evidence map›Paper›PMID 23765412›Full record

ArticleBiopolymers2013

Solution phase conformation and proteolytic stability of amide-linked neuraminic acid analogues.

Jonel P Saludes, Travis Q Gregar, I Abrrey Monreal, Brandan M Cook, Lieza M Danan-Leon, Jacquelyn Gervay-Hague

Abstract read
In one paragraph

Article in Biopolymers, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. A facile microwave-assisted protocol for rapid synthesis ofNew journal of chemistry = Nouveau journal de chimie · 2014
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Jonel P SaludesDepartment of Chemistry, , University of California Davis, One Shields Ave., Davis, CA, 95616; Department of Chemistry, Washington State University, Pullman, WA, 99164.
Travis Q Gregar
I Abrrey Monreal
Brandan M Cook
Lieza M Danan-Leon
Jacquelyn Gervay-Hague

Funding

500 MHZ NMR SPECTROMETER PURCHASES10RR006314 · NCRR · WASHINGTON STATE UNIVERSITY · PI SATTERLEE, JAMES D. · 1991 to 1991
–
ACQUISITION OF 500 MHZ NMR SPECTROMETERS10RR011973 · NCRR · UNIVERSITY OF CALIFORNIA DAVIS · PI LA MAR, GERD N · 1997 to 1997
–
AQUISITION OF A 600 MHZ NMR SPECTROMETERS10RR012948 · NCRR · WASHINGTON STATE UNIVERSITY · PI EVANS, JEREMY N · 1998 to 1998
–
NCRR NIH HHS RR0631401NCRR NIH HHS S10 RR006314NCRR NIH HHS S10 RR011973NCRR NIH HHS S10 RR012948
6 · The paper itself

Abstract

Amide-linked homopolymers of sialic acid offer the advantages of stable secondary structure and increased bioavailability making them useful constructs for pharmaceutical design and drug delivery. Defining the structural characteristics that give rise to secondary structure in aqueous solution is challenging in homopolymeric material due to spectral overlap in NMR spectra. Having previously developed computational tools for heteroologomers with resolved spectra, we now report that application of these methods in combination with circular dichroism, NH/ND NMR exchange rates and nOe data has enabled the structural determination of a neutral, δ-amide-linked homopolymer of a sialic acid analogue called Neu2en. The results show that the inherent planarity of the pyranose ring in Neu2en brought about by the α,δ-conjugated amide bond serves as the primary driving force of the overall conformation of the homooligomer. This peptide surrogate has an excellent bioavailability profile, with half-life of ∼12 h in human blood serum, which offers a viable peptide scaffold that is resistant to proteolytic degradation. Furthermore, a proof-of-principle study illustrates that Neu2en oligomers are functionalizable with small molecule ligands using 1,3-dipolar cycloaddition chemistry.

Indexed as

Amino Acid SequenceProtein Structure, SecondaryAmidesCircular DichroismHumansMolecular Sequence DataProtein ConformationSolutionsAmidesSolutions1,3-dipolar cycloaddition chemistryblood serumcircular dichroismclick chemistryhelical peptideNeu2enNMRproteolysissialic acidwater-soluble scaffold

Identifiers

PMID23765412
PMCPMC3844683

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.