Evidence map›Paper›PMID 23765285›Full record

ArticleBiomolecular NMR assignments2014

Backbone and side-chain assignments of an effector membrane localization domain from Vibrio vulnificus MARTX toxin.

Michael C Brothers, Brett Geissler, Grant S Hisao, Brenda A Wilson, Karla J F Satchell, Chad M Rienstra

Open access · greenAbstract read
In one paragraph

Article in Biomolecular NMR assignments, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.0field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 4 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Michael C BrothersDepartment of Chemistry, University of Illinois at Urbana-Champaign, Urbana, IL, 61801, USA.
Brett Geissler
Grant S Hisao
Brenda A Wilson
Karla J F Satchell
Chad M Rienstra
University of Illinois Urbana-Champaign · USNorthwestern University · US

Funding

Training Program in Chemistry-Interface with BiologyT32GM070421 · NIGMS · UNIVERSITY OF ILLINOIS URBANA-CHAMPAIGN · PI HERGENROTHER, PAUL · 2005 to 2019
$5.4M
Molecular mechanism of V. vulnificus MARTX toxin in pathogenesis and food safetyR01AI092825 · NIAID · NORTHWESTERN UNIVERSITY AT CHICAGO · PI SATCHELL, KARLA J F · 2011 to 2021
$4.1M
Genetic and biochemical study ov V. cholerase RTX toxinR01AI051490 · NIAID · NORTHWESTERN UNIVERSITY AT CHICAGO · PI SATCHELL, KARLA J F · 2003 to 2012
$3.3M
Vibrio MARTX toxin effectors in signaling and pathogenesisR37AI092825 · NIAID · NORTHWESTERN UNIVERSITY AT CHICAGO · PI Karla J F Satchell · 2022 to 2026
$2.5M
Pasteurella multocida toxin: Structure and ActivityR01AI038396 · NIAID · UNIVERSITY OF ILLINOIS URBANA-CHAMPAIGN · PI WILSON, BRENDA A. · 2004 to 2008
$1.7M
PASTEURELLA MULTOCIDA TOXIN--STRUCTURE AND ACTIVITYR29AI038396 · NIAID · WRIGHT STATE UNIVERSITY · PI WILSON, BRENDA A. · 1996 to 2000
$105k
NIAID NIH HHS AI038396NIAID NIH HHS AI051490NIAID NIH HHS AI092825NIAID NIH HHS R01 AI038396NIAID NIH HHS R01 AI051490NIAID NIH HHS R01 AI092825NIAID NIH HHS R29 AI038396NIAID NIH HHS R37 AI092825NIGMS NIH HHS T32 GM070421
6 · The paper itself

Abstract

(1)H, (13)C, and (15)N chemical shift assignments are presented for the isolated four-helical bundle membrane localization domain from the domain of unknown function 5 (DUF5) effector (MLD(VvDUF5)) of the MARTX toxin from Vibrio vulnificus in its solution state. We have assigned 97% of all backbone and side-chain carbon atoms, including 96% of all backbone residues. Secondary chemical shift analysis using TALOS+ demonstrates four helices that align with those predicted by structure homology modeling using the MLDs of Pasteurella multocida toxin (PMT) and the clostridial TcdB and TcsL toxins as templates. Future studies will be towards solving the structure and determining the dynamics in the solution state.

Indexed as

Nuclear Magnetic Resonance, BiomolecularVibrio vulnificusBacterial ToxinsCell MembraneProtein Structure, SecondaryProtein TransportBacterial ToxinsRtxA protein, Vibrio cholerae

Identifiers

PMID23765285
PMCPMC3859858
OpenAlexW1973527857

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.