Evidence map›Paper›PMID 23765228›Full record

ArticleLeukemia2013

Toll-like receptor alterations in myelodysplastic syndrome.

Y Wei, S Dimicoli, C Bueso-Ramos, R Chen, H Yang, D Neuberg, S Pierce, Y Jia, H Zheng, H Wang and 11 more

Abstract read
In one paragraph

Article in Leukemia, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 106 papers.

0numbers the graph read from it
0cells of the map it votes in
106citing papers in PubMed
4.7field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

106 citing papers in PubMed, 158 citations in OpenAlex.

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  16. Vaccines: a promising therapy for myelodysplastic syndrome.Journal of hematology & oncology · 2024
    Review
  17. Article
  18. Article
  19. Article
  20. Review

46 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 5 institutions in 2 countries.

Y WeiDepartment of Leukemia, The University of Texas MD Anderson Cancer Center, Houston, TX, USA.
S Dimicoli
C Bueso-Ramos
R Chen
H Yang
D Neuberg
S Pierce
Y Jia
H Zheng
H Wang
X Wang
M Nguyen
S A Wang
B Ebert
R Bejar
R Levine
O Abdel-Wahab
M Kleppe
I Ganan-Gomez
H Kantarjian
G Garcia-Manero
The University of Texas MD Anderson Cancer Center · USBaylor College of Medicine · USMemorial Sloan Kettering Cancer Center · USBrigham and Women's Hospital · USDana-Farber Cancer Institute · US

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Nicholas D Socci · 1985 to 2026
$347.4M
Tumor Evolution and Metastasis ProgramP30CA016672 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI Scott Kopetz · 1985 to 2026
$290.8M
University of Texas M.D. Anderson Cancer SPORE-LeukemiaP50CA100632 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI KONOPLEVA, MARINA Y · 2003 to 2023
$43.7M
Characterization of Genetic Abnormalities in MDS and Their Clinical ImpactK08DK091360 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI BEJAR, RAFAEL · 2012 to 2016
$789k
NCI NIH HHS CA016672NCI NIH HHS CA100632NCI NIH HHS P30 CA008748NCI NIH HHS P30 CA016672NCI NIH HHS P50 CA100632NIDDK NIH HHS K08 DK091360
6 · The paper itself

Abstract

Recent studies have implicated the innate immunity system in the pathogenesis of myelodysplastic syndromes (MDS). Toll-like receptor (TLR) genes encode key innate immunity signal initiators. We recently identified multiple genes, known to be regulated by TLRs, to be overexpressed in MDS bone marrow (BM) CD34+ cells, and hypothesized that TLR signaling is abnormally activated in MDS. We analyzed a large cohort of MDS cases and identified TLR1, TLR2 and TLR6 to be significantly overexpressed in MDS BM CD34+ cells. Deep sequencing followed by Sanger resequencing of TLR1, TLR2, TLR4 and TLR6 genes uncovered a recurrent genetic variant, TLR2-F217S, in 11% of 149 patients. Functionally, TLR2-F217S results in enhanced activation of downstream signaling including NF-κB activity after TLR2 agonist treatment. In cultured primary BM CD34+ cells of normal donors, TLR2 agonists induced histone demethylase JMJD3 and interleukin-8 gene expression. Inhibition of TLR2 in BM CD34+ cells from patients with lower-risk MDS using short hairpin RNA resulted in increased erythroid colony formation. Finally, RNA expression levels of TLR2 and TLR6, as well as presence of TLR2-F217S, are associated with distinct prognosis and clinical characteristics. These findings indicate that TLR2-centered signaling is deregulated in MDS, and that its targeting may have potential therapeutic benefit in MDS.

Indexed as

Amino Acid SequenceAmino Acid SubstitutionAntigens, CD34Base SequenceBone Marrow CellsCell DifferentiationErythroid CellsGene ExpressionGene OrderHumansImmunity, InnateInterleukin-8Jumonji Domain-Containing Histone DemethylasesModels, BiologicalMolecular Sequence DataMutationAntigens, CD34Interleukin-8Jumonji Domain-Containing Histone DemethylasesKDM6B protein, humanToll-Like Receptor 1Toll-Like Receptor 2Toll-Like Receptor 6Toll-Like Receptors

Identifiers

PMID23765228
PMCPMC4011663
OpenAlexW2131095909

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.