ArticlePloS one2013
The development of 7E chromosome-specific molecular markers for Thinopyrum elongatum based on SLAF-seq technology.
Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 63 papers.
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63 citing papers in PubMed.
- A 4NsL chromosome segment fromFrontiers in plant science · 2025Article
- Development and identification of a novel wheat-Thinopyrum ponticum disomic substitution line DS5Ag(5D) with new genes conferring resistance to powdery mildew and leaf rust.BMC plant biology · 2024Article
- Construction of a high-density genetic map based on large-scale marker development in Coix lacryma-jobi L. using specific-locus amplified fragment sequencing (slaf-seq).Scientific reports · 2024Article
- Identification and introgression of a novel leaf rust resistance gene from Thinopyrum intermedium chromosome 7JTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2023Article
- Development and Characterization of a Novel Wheat-TetraploidPlants (Basel, Switzerland) · 2023Article
- Genetic analysis of resistance to powdery mildew on 7MBMC plant biology · 2022Article
- Identification and DNA Marker Development for a Wheat-International journal of molecular sciences · 2022Article
- Candidate powdery mildew resistance gene in wheat landrace cultivar Hongyoumai discovered using SLAF and BSR-seq.BMC plant biology · 2022Article
- Investigation of genetic relationships within three Miscanthus species using SNP markers identified with SLAF-seq.BMC genomics · 2022Article
- Construction of High-Density Genetic Map and Identification of a Bruchid Resistance Locus in Mung Bean (Frontiers in genetics · 2022Article
- Cytogenetic identification and molecular marker development of a novel wheat-Frontiers in plant science · 2022Article
- Molecular cytogenetics for a wheat-Aegilops geniculata 3MBMC plant biology · 2021Article
- Chromosomal composition analysis and molecular marker development for the novel Ug99-resistant wheat-Thinopyrum ponticum translocation line WTT34.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2021Article
- SNP detection and population structure evaluation ofPhysiology and molecular biology of plants : an international journal of functional plant biology · 2021Article
- Identification of a Wheat-Frontiers in plant science · 2021Article
- Exploiting the genome of Thinopyrum elongatum to expand the gene pool of hexaploid wheat.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2020Article
- Molecular Cytogenetic Identification of Wheat-International journal of molecular sciences · 2020Article
- Cytogenetic Analysis and Molecular Marker Development for a New Wheat-Frontiers in plant science · 2020Article
- Construction of a High-Density Genetic Map Based on SLAF Markers and QTL Analysis of Leaf Size in Rice.Frontiers in plant science · 2020Article
- Characterization of a wheat-tetraploid Thinopyrum elongatum 1E(1D) substitution line K17-841-1 by cytological and phenotypic analysis and developed molecular markers.BMC genomics · 2019Article
3 more citing papers are in PubMed but not listed here.
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8 authors.
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Abstract
Thinopyrum elongatum is an important relative of wheat, it is favored by many researchers for the disease resistant genes that exist in its E genome. Some studies have showed that the 7E chromosome of Th. elongatum contains resistance genes related to Fusarium head blight and wheat rust. Therefore, developing 7E chromosome-specific molecular markers linked to resistance genes will provide an important tool for exploring and using the resistant genes of Th. elongatum. In addition, it would greatly contribute in the effort to cultivate disease-resistant wheat varieties. Featured in high throughput, high-accuracy and low-cost, SLAF-seq technology has been widely used in molecular breeding, system evolution, and germplasm resource detection. Based on SLAF-seq, 518 specific fragments on the 7E chromosome of Th. elongatum were successfully amplified. A total of 135 primers were designed according to 135 randomly selected fragments, and 89 specific molecular markers of Th. elongatum were developed, with efficiencies up to 65.9%. These markers were all detected in a variety of materials, and they are all proved to be specific and stable. These markers can be used not only for detecting the 7E chromosome of Th. elongatum but also for providing an important theoretical and practical basis for wheat breeding by marker-assisted selection (MAS). This paper reports the first application of SLAF-seq technology with a high success rate in developing specific molecular markers for Th. elongatum, providing a strong case for the application of this new technology.
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