Evidence map›Paper›PMID 23761071›Full record

ArticleMolecular biology of the cell2013

A light-inducible organelle-targeting system for dynamically activating and inactivating signaling in budding yeast.

Xiaojing Yang, Anna Payne-Tobin Jost, Orion D Weiner, Chao Tang

Abstract read
In one paragraph

Article in Molecular biology of the cell, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 52 papers.

0numbers the graph read from it
0cells of the map it votes in
52citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

52 citing papers in PubMed.

  1. Review
  2. Review
  3. Characterizing Optogenetic Tools for Use in Synthetic Gene Circuits.Methods in molecular biology (Clifton, N.J.) · 2026
    Article
  4. Article
  5. Review
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  11. Article
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  16. Review
  17. Article
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  19. Light-activated protein interaction with high spatial subcellular confinement.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Xiaojing YangDepartment of Bioengineering and Therapeutic Sciences, University of California, San Francisco, San Francisco, CA 94158, USA.
Anna Payne-Tobin Jost
Orion D Weiner
Chao Tang

Funding

Rewiring Therapeutic Cells: User-Controlled T Cells and Stem CellsP50GM081879 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI LIM, WENDELL A · 2010 to 2017
$19.0M
Signal Integration in Neutrophil ChemotaxisR01GM084040 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI WEINER, ORION D · 2008 to 2015
$2.6M
A Toolkit for Light-Control of Molecular Processes in Living CellsR01GM096164 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI VOIGT, CHRISTOPHER A, WEINER, ORION D · 2012 to 2015
$1.8M
Quantitative studies of cell cycle checkpoints and switchesR01GM097115 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI MORGAN, DAVID OWEN · 2011 to 2014
$1.5M
An optogenetic method to rapidly and reversibly titrate protein levels in cellsR21EB017399 · NIBIB · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI WEINER, ORION D · 2013 to 2014
$409k
NIBIB NIH HHS R21 EB017399NIGMS NIH HHS GM084040NIGMS NIH HHS GM096164NIGMS NIH HHS GM097115NIGMS NIH HHS P50 GM081879NIGMS NIH HHS R01 GM084040NIGMS NIH HHS R01 GM096164NIGMS NIH HHS R01 GM097115
6 · The paper itself

Abstract

Protein localization plays a central role in cell biology. Although powerful tools exist to assay the spatial and temporal dynamics of proteins in living cells, our ability to control these dynamics has been much more limited. We previously used the phytochrome B- phytochrome-interacting factor light-gated dimerization system to recruit proteins to the plasma membrane, enabling us to control the activation of intracellular signals in mammalian cells. Here we extend this approach to achieve rapid, reversible, and titratable control of protein localization for eight different organelles/positions in budding yeast. By tagging genes at the endogenous locus, we can recruit proteins to or away from their normal sites of action. This system provides a general strategy for dynamically activating or inactivating proteins of interest by controlling their localization and therefore their availability to binding partners and substrates, as we demonstrate for galactose signaling. More importantly, the temporal and spatial precision of the system make it possible to identify when and where a given protein's activity is necessary for function, as we demonstrate for the mitotic cyclin Clb2 in nuclear fission and spindle stabilization. Our light-inducible organelle-targeting system represents a powerful approach for achieving a better understanding of complex biological systems.

Indexed as

OptogeneticsCDC2 Protein KinaseCell NucleusCyclin BLightNuclear FissionOrganellesPhytochrome BPromoter Regions, GeneticProtein StabilityProtein TransportRecombinant Fusion ProteinsSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsSignal TransductionSpindle ApparatusCDC2 Protein KinaseCLB2 protein, S cerevisiaeCyclin BPhytochrome BRecombinant Fusion ProteinsSaccharomyces cerevisiae Proteins

Identifiers

PMID23761071
PMCPMC3727934

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.