Evidence map›Paper›PMID 23760507›Full record

ArticleThe Journal of biological chemistry2013

Subunit architecture of the Golgi Dsc E3 ligase required for sterol regulatory element-binding protein (SREBP) cleavage in fission yeast.

S Julie-Ann Lloyd, Sumana Raychaudhuri, Peter J Espenshade

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
1.6field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 46 citations in OpenAlex.

  1. Article
  2. The Dsc complex and its role in Golgi quality control.Biochemical Society transactions · 2024
    Review
  3. Article
  4. Article
  5. Review
  6. Ubiquitin-mediated degradation at the Golgi apparatus.Frontiers in molecular biosciences · 2023
    Review
  7. Review
  8. Review
  9. Article
  10. Review
  11. Article
  12. Article
  13. Review
  14. Article
  15. Proteostatic Tactics in the Strategy of Sterol Regulation.Annual review of cell and developmental biology · 2017
    Review
  16. Article
  17. Article
  18. Rhomboids, signalling and cell biology.Biochemical Society transactions · 2016
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

S Julie-Ann LloydFrom the Department of Cell Biology, The Johns Hopkins University School of Medicine, Baltimore, Maryland 21205.
Sumana RaychaudhuriFrom the Department of Cell Biology, The Johns Hopkins University School of Medicine, Baltimore, Maryland 21205.
Peter J EspenshadeFrom the Department of Cell Biology, The Johns Hopkins University School of Medicine, Baltimore, Maryland 21205. Electronic address: peter.espenshade@jhmi.edu.
Johns Hopkins Medicine · USJohns Hopkins University · US

Funding

JHU-UMD Diabetes Research CenterP30DK079637 · NIDDK · JOHNS HOPKINS UNIVERSITY · PI HUSSAIN, MEHBOOB A · 2013 to 2017
$9.7M
Regulation of Cellular Cholesterol HomeostasisR01HL077588 · NHLBI · JOHNS HOPKINS UNIVERSITY · PI ESPENSHADE, PETER J. · 2004 to 2022
$7.8M
Effects of Arginase in Right Ventricular Hypertrophy and FailureF31HL097668 · NHLBI · JOHNS HOPKINS UNIVERSITY · PI LLOYD, S. JULIE-ANN JULIE-ANN · 2009 to 2012
$187k
NHLBI NIH HHS F31 HL097668NHLBI NIH HHS R01 HL077588NIDDK NIH HHS P30 DK079637
6 · The paper itself

Abstract

The membrane-bound sterol regulatory element-binding protein (SREBP) transcription factors regulate lipogenesis in mammalian cells and are activated through sequential cleavage by the Golgi-localized Site-1 and Site-2 proteases. The mechanism of fission yeast SREBP cleavage is less well defined and, in contrast, requires the Golgi-localized Dsc E3 ligase complex. The Dsc E3 ligase consists of five integral membrane subunits, Dsc1 through Dsc5, and resembles membrane E3 ligases that function in endoplasmic reticulum-associated degradation. Using immunoprecipitation assays and blue native electrophoresis, we determined the subunit architecture for the complex of Dsc1 through Dsc5, showing that the Dsc proteins form subcomplexes and display defined connectivity. Dsc2 is a rhomboid pseudoprotease family member homologous to mammalian UBAC2 and a central component of the Dsc E3 ligase. We identified conservation in the architecture of the Dsc E3 ligase and the multisubunit E3 ligase gp78 in mammals. Specifically, Dsc1-Dsc2-Dsc5 forms a complex resembling gp78-UBAC2-UBXD8. Further characterization of Dsc2 revealed that its C-terminal UBA domain can bind to ubiquitin chains but that the Dsc2 UBA domain is not essential for yeast SREBP cleavage. Based on the ability of rhomboid superfamily members to bind transmembrane proteins, we speculate that Dsc2 functions in SREBP recognition and binding. Homologs of Dsc1 through Dsc4 are required for SREBP cleavage and virulence in the human opportunistic pathogen Aspergillus fumigatus. Thus, these studies advance our organizational understanding of multisubunit E3 ligases involved in endoplasmic reticulum-associated degradation and fungal pathogenesis.

Indexed as

Amino Acid SequenceGlycosylationGolgi ApparatusHumansMolecular Sequence DataMultiprotein ComplexesProtein BindingProtein Structure, TertiaryProtein SubunitsSchizosaccharomycesSchizosaccharomyces pombe ProteinsSequence AlignmentSterol Regulatory Element Binding ProteinsUbiquitinUbiquitin-Protein LigasesMultiprotein ComplexesProtein SubunitsSchizosaccharomyces pombe ProteinsSre1 protein, S pombeSterol Regulatory Element Binding ProteinsUbiquitinUbiquitin-Protein LigasesER-associated DegradationHypoxiaSREBPTranscription FactorsUbiquitinUbiquitin Ligase

Identifiers

PMID23760507
PMCPMC3774371
OpenAlexW2035636032

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.