ArticleJournal of virology2013
Morphology, physiological characteristics, and complete sequence of marine bacteriophage ϕRIO-1 infecting Pseudoalteromonas marina.
Article in Journal of virology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.
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Who cites it
16 citing papers in PubMed.
- Transport and Survival of Marine Tracer Phages in Topsoil at Field Conditions.Environmental science & technology · 2026Article
- Isolation, Characterization, and Genomic Analysis of Bacteriophages AgainstMicroorganisms · 2025Article
- Genomic Analysis of Two Cold-ActiveViruses · 2023Article
- Isolation and Characterization of the FirstInternational journal of molecular sciences · 2023Article
- A Novel Phage Indirectly Regulates Diatom Growth by Infecting a Diatom-Associated Biofilm-Forming Bacterium.Applied and environmental microbiology · 2022Article
- Phage-specific metabolic reprogramming of virocells.The ISME journal · 2020Article
- Metagenome Mining Reveals Hidden Genomic Diversity of Pelagimyophages in Aquatic Environments.mSystems · 2020Article
- Cobaviruses - a new globally distributed phage group infecting Rhodobacteraceae in marine ecosystems.The ISME journal · 2019Article
- Complete Genome Sequence of Sinorhizobium Phage ΦM6, the First Terrestrial Phage of a Marine Phage Group.Microbiology resource announcements · 2018Article
- Article
- Nutrients and Other Environmental Factors Influence Virus Abundances across Oxic and Hypoxic Marine Environments.Viruses · 2017Article
- Comparative Omics and Trait Analyses of MarineFrontiers in microbiology · 2017Article
- Article
- Complete Genome of a Novel Pseudoalteromonas Phage PHq0.Current microbiology · 2016Article
- Characterization and Genome Sequencing of a Novel Bacteriophage PH101 Infecting Pseudoalteromonas marina BH101 from the Yellow Sea of China.Current microbiology · 2015Article
- Life-style and genome structure of marine Pseudoalteromonas siphovirus B8b isolated from the northwestern Mediterranean Sea.PloS one · 2015Article
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Authors and funding
5 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Bacteria of the genus Pseudoalteromonas are ubiquitous in the world's oceans. Marine bacteria have been posited to be associated with a major ancient branch of podoviruses related to T7. Yet, although Pseudoalteromonas phages belonging to the Corticoviridae and the Siphoviridae and prophages belonging to the Myoviridae have been reported, no Pseudoalteromonas podovirus was previously known. Here, a new lytic Pseudoalteromonas marina phage, ϕRIO-1, belonging to the Podoviridae was isolated and characterized with respect to morphology, genomic sequence, and biological properties. Its major encoded proteins were distantly similar to those of T7. The most similar previously sequenced viruses were Pseudomonas phage PA11 and Salinivibrio phage CW02. Whereas many elements of the morphology and gene organization of ϕRIO-1 are similar to those of podoviruses broadly related to T7, ϕRIO-1 conspicuously lacked an RNA polymerase gene. Since definitions of a T7 supergroup have included similarity in the DNA polymerase gene, a detailed phylogenetic analysis was conducted, and two major DNA polymerase clades in Autographivirinae and several structural variants of the polA family represented in podoviruses were found. ϕRIO-1 carries an operon similar to that in a few other podoviruses predicted to specify activities related to γ-glutamyl amide linkages and/or unusual peptide bonds. Most growth properties of ϕRIO-1 were typical of T7-like phages, except for a long latent period.
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