Evidence map›Paper›PMID 23759987›Full record

ArticleInternational journal of molecular sciences2013

Characterization of the Pinus massoniana transcriptional response to Bursaphelenchus xylophilus infection using suppression subtractive hybridization.

Liang Xu, Zhen-Yu Liu, Kai Zhang, Quan Lu, Jun Liang, Xing-Yao Zhang

Abstract read
In one paragraph

Article in International journal of molecular sciences, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Insights Into the Mechanisms Implicated inFrontiers in plant science · 2021
    Article
  7. Roles of hormones, calcium andForestry research · 2021
    Article
  8. International journal of molecular sciences · 2019
    Article
  9. Article
  10. Comparative Transcriptome Analysis of the Pinewood NematodeInternational journal of molecular sciences · 2019
    Article
  11. Article
  12. Frontiers in plant science · 2017
    Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Liang XuCollege of Forestry, Beijing Forestry University, Beijing 100083, China. cosmosliuchina@gmail.com.
Zhen-Yu Liu
Kai Zhang
Quan Lu
Jun Liang
Xing-Yao Zhang

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Pine wilt disease (PWD) caused by pine wood nematode (PWN), Bursaphelenchus xylophilus, is the most destructive diseases of pine and poses a threat of serious economic losses worldwide. Although several of the mechanisms involved in disease progression have been discovered, the molecular response of Pinus massoniana to PWN infection has not been explored. We constructed four subtractive suppression hybridization cDNA libraries by taking time-course samples from PWN-inoculated Masson pine trees. One-hundred forty-four significantly differentially expressed sequence tags (ESTs) were identified, and 124 high-quality sequences with transcriptional features were selected for gene ontology (GO) and individual gene analyses. There were marked differences in the types of transcripts, as well as in the timing and levels of transcript expression in the pine trees following PWN inoculation. Genes involved in signal transduction, transcription and translation and secondary metabolism were highly expressed after 24 h and 72 h, while stress response genes were highly expressed only after 72 h. Certain transcripts responding to PWN infection were discriminative; pathogenesis and cell wall-related genes were more abundant, while detoxification or redox process-related genes were less abundant. This study provides new insights into the molecular mechanisms that control the biochemical and physiological responses of pine trees to PWN infection, particularly during the initial stage of infection.

Indexed as

Transcription, GeneticAnimalsExpressed Sequence TagsGene Expression ProfilingGene Expression Regulation, PlantGene LibraryGenes, PlantPinusPlant DiseasesReal-Time Polymerase Chain ReactionReproducibility of ResultsRNA, MessengerSubtractive Hybridization TechniquesTreesTylenchidaRNA, Messenger

Identifiers

PMID23759987
PMCPMC3709736

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.