Evidence map›Paper›PMID 23758517›Full record

ArticleJournal of the American Chemical Society2013

Specificity profiling of protein phosphatases toward phosphoseryl and phosphothreonyl peptides.

Qing Xiao, Rinrada Luechapanichkul, Yujing Zhai, Dehua Pei

Open access · greenAbstract read
In one paragraph

Article in Journal of the American Chemical Society, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.2field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 14 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Qing XiaoDepartment of Chemistry and Biochemistry, The Ohio State University, 484 West 12th Ave., Columbus, Ohio 43210, USA.
Rinrada Luechapanichkul
Yujing Zhai
Dehua Pei
The Ohio State University · US

Funding

Recognition and Catalysis of Phosphotyrosyl ProteinsR01GM062820 · NIGMS · OHIO STATE UNIVERSITY · PI PEI, DEHUA · 2003 to 2015
$3.2M
Substrate Profiling of Protein Tyrosine PhosphatasesR01CA132855 · NCI · OHIO STATE UNIVERSITY · PI PEI, DEHUA · 2009 to 2013
$1.3M
NCI NIH HHS CA132855NCI NIH HHS R01 CA132855NIGMS NIH HHS GM062820NIGMS NIH HHS R01 GM062820
6 · The paper itself

Abstract

A combinatorial library method was developed to systematically profile the substrate specificity of protein phosphatases toward phosphoseryl (pS) and phosphothreonyl (pT) peptides. Application of this method and a previously reported phosphotyrosyl (pY) library screening technique to dual-specificity phosphatase (DUSP) VH1 of vaccinia virus revealed that VH1 is highly active toward both pS/pT and pY peptides. VH1 exhibits different and more stringent sequence specificity toward pS/pT than pY substrates. Unlike previously characterized protein tyrosine phosphatases (PTPs), the activity and specificity of VH1 are primarily determined by the amino acid residues C-terminal to the pS, pT, or pY residue. In contrast, the mammalian VH1-related (VHR) DUSP has intrinsically low catalytic activity toward pS and pT substrates, suggesting that its primary physiological function is to dephosphorylate pY residues in substrate proteins. This method is applicable to other DUSPs and protein-serine/threonine phosphatases, and the substrate specificity data will be useful for identifying the physiological substrates of these enzymes.

Indexed as

Combinatorial Chemistry TechniquesMolecular StructurePeptide LibraryPeptidesPhosphoric Monoester HydrolasesPhosphoserinePhosphothreonineSubstrate SpecificityPeptide LibraryPeptidesPhosphoric Monoester HydrolasesPhosphoserinePhosphothreonine

Identifiers

PMID23758517
PMCPMC3740347
OpenAlexW2001666812

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.